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calcChargeStateIntensities_() :
ProtonDistributionModel
calcGDilatation_() :
MorphFilter
calcGErosion_() :
MorphFilter
calcGridLines() :
AxisTickCalculator
calcHDilatation_() :
MorphFilter
calcHErosion_() :
MorphFilter
calcLogGridLines() :
AxisTickCalculator
calculateCalibCoeffs_() :
TOFCalibration
calculateGaussTable() :
SVMWrapper
calculateGridLines_() :
Spectrum3DOpenGLCanvas
calculateProtonDistribution_() :
ProtonDistributionModel
calibrate() :
InternalCalibration
,
TOFCalibration
calibrate_() :
InternalCalibration
canvas() :
Spectrum1DWidget
,
Spectrum2DWidget
,
Spectrum3DWidget
,
SpectrumWidget
capacity() :
DPeakConstReferenceArray
center() :
DIntervalBase
centerOfBin() :
Histogram
changeLayerFlag() :
TOPPViewBase
changeLegendVisibility() :
SpectrumCanvas
,
SpectrumWidget
changeVisibility() :
SpectrumCanvas
changeVisibleArea_() :
Spectrum1DCanvas
,
Spectrum3DCanvas
,
SpectrumCanvas
characters() :
FeaturePairsHandler
,
FeatureXMLHandler
,
GridHandler
,
MascotXMLHandler
,
MzDataExpSettHandler
,
MzDataHandler
,
MzXMLHandler
,
OMSSAXMLHandler
,
PTMXMLHandler
,
XMLHandler
,
ConsensusXMLHandler
ChargedIndexSet() :
IsotopeCluster::ChargedIndexSet
check_() :
DataFilterDialog
checkDBVersion() :
DBAdapter
checkDefaults() :
Param
checkFWHM_() :
OptimizePeakDeconvolution
checkNeighbour_() :
SimpleExtender
checkParam_() :
TOPPBase
checkPosition_() :
IsotopeWaveletTransform
checkPreferences_() :
TOPPViewBase
checkSize() :
SaveImageDialog
chordTrapezoidRule_() :
IsotopeWaveletTransform
clear() :
Param
,
SparseVector
,
DataFilters
,
StringManager
,
DPeakConstReferenceArray
,
DSpectrum
,
AveragePosition
,
BasicStatistics
,
MetaInfo
,
StopWatch
,
ParamEditor
,
IsotopeDistribution
,
PreciseTime
,
TimeStamp
,
ConvexHull2D
,
Date
,
DateTime
,
DIntervalBase
,
DPosition
,
HashMap
,
Matrix
clear_() :
ElementDB
,
ResidueDB
,
BinnedRep
,
MetaInfoVisualizer
clearChildIds_() :
PersistentObject
,
DPeakArray
,
MSExperiment
,
MSSpectrum
clearEluents() :
Gradient
clearId() :
PersistentObject
clearMetaInfo() :
MetaInfoInterface
clearMSLevels() :
PeakFileOptions
clearPercentages() :
Gradient
clearRanges() :
RangeManager
clearResidueModifications_() :
ResidueDB
clearResidues_() :
ResidueDB
clearTimepoints() :
Gradient
clone() :
Digestion
,
Modification
,
SampleTreatment
,
Tagging
closeByTab() :
TOPPViewBase
closeEvent() :
INIFileEditorWindow
,
TOPPViewBase
closeFile() :
TOPPViewBase
closeSwapFileHandle() :
File
clusterSeeds_() :
IsotopeWaveletTransform
colIndex() :
Matrix
color() :
MultiGradient
ColorSelector() :
ColorSelector
cols() :
Matrix
compare_files() :
FuzzyStringComparator
compare_lines_() :
FuzzyStringComparator
compare_streams() :
FuzzyStringComparator
compare_strings() :
FuzzyStringComparator
comparepeaks_() :
SpectrumCheapDPCorr
ComplementFilter() :
ComplementFilter
ComplementMarker() :
ComplementMarker
compressTrieDB() :
InspectOutfile
compute() :
FeatureDecharger
,
HierarchicalClustering
computeConsensus_() :
ConsensusFeature
,
ConsensusPeak
computeConsensusMap() :
DelaunayPairFinder
computeElementBuckets_() :
PoseClusteringShiftSuperimposer
computeFeatureStats_() :
LayerStatisticsDialog
computeGoodness_() :
LinearRegression
computeGridCellIndex_() :
BasePairFinder
computeInterceptXAxis() :
LinearRegression
computeInterceptXAxisWeighted() :
LinearRegression
computeIsotopeDistributionSize_() :
IsotopeWavelet
computeKernelMatrix() :
SVMWrapper
computeMatching_() :
PoseClusteringPairwiseMapMatcher
computeMetaAverages_() :
LayerStatisticsDialog
computePeakPriority_() :
SimpleExtender
computePeakStats_() :
LayerStatisticsDialog
computeSelection() :
Spectrum3DOpenGLCanvas
computeShift_() :
PoseClusteringShiftSuperimposer
computeShiftBuckets_() :
PoseClusteringShiftSuperimposer
computeSTN_() :
SignalToNoiseEstimator
,
SignalToNoiseEstimatorMeanIterative
,
SignalToNoiseEstimatorMedian
connect() :
DBConnection
connectVisualizer_() :
MSMetaDataExplorer
ConsensusFeature() :
ConsensusFeature
ConsensusID() :
ConsensusID
ConsensusMap() :
ConsensusMap
ConsensusPeak() :
ConsensusPeak
ConsensusXMLFile() :
ConsensusXMLFile
ConsensusXMLHandler() :
ConsensusXMLHandler
ConstIterator() :
HashMap::ConstIterator
construct() :
ExternalAllocator
ContactPerson() :
ContactPerson
ContactPersonVisualizer() :
ContactPersonVisualizer
contains() :
StringList
containsMSLevel() :
PeakFileOptions
contextMenuEvent() :
EnhancedTabBar
,
Spectrum1DCanvas
,
Spectrum2DCanvas
,
Spectrum3DCanvas
ContinuousWaveletTransform() :
ContinuousWaveletTransform
ContinuousWaveletTransformNumIntegration() :
ContinuousWaveletTransformNumIntegration
ConversionError() :
ConversionError
convert() :
StringManager
ConvexHull2D() :
ConvexHull2D
convolve_() :
IsotopeDistribution
convolvePow_() :
IsotopeDistribution
convolveSquare_() :
IsotopeDistribution
copy() :
Param
correlate_() :
OptimizePick
,
PeakPickerCWT
count() :
Group
countTreatments() :
Sample
create() :
SpectrumCheapDPCorr
,
IsotopeFitter1D
,
FastaIterator
,
NeutralLossDiffFilter
,
FeatureFinderAlgorithmSimplest
,
PoseClusteringPairwiseMapMatcher
,
IsotopeDiffFilter
,
ExtendedIsotopeFitter1D
,
IsotopeMarker
,
Scaler
,
GaussFitter1D
,
IntensityBalanceFilter
,
ProductModel
,
EmgModel
,
MarkerMower
,
BinnedRepSpectrumContrastAngle
,
BernNorm
,
ComplementFilter
,
BinnedRepSharedPeakCount
,
StringList
,
GoodDiffFilter
,
SpectrumPrecursorComparator
,
FastaIteratorIntern
,
LmaGaussFitter1D
,
ComplementMarker
,
PoseClusteringAffineSuperimposer
,
NLargest
,
LmaIsotopeFitter1D
,
ParentFilter
,
BinnedRepSumAgreeingIntensities
,
PeakDensityFilter
,
Factory
,
SimplePairFinder
,
TICFilter
,
ExtendedIsotopeModel
,
Normalizer
,
BiGaussFitter1D
,
WindowMower
,
SqrtMower
,
EmgFitter1D
,
BiGaussModel
,
EdwardsLippertIterator
,
DelaunayPairFinder
,
LmaGaussModel
,
PoseClusteringShiftSuperimposer
,
ThresholdMower
,
EdwardsLippertIteratorTryptic
,
TrypticIterator
,
NeutralLossMarker
,
IsotopeModel
,
FeatureFinderAlgorithmSimple
,
FeatureFinderAlgorithmPicked
,
GaussModel
,
ZhangSimilarityScore
,
LmaIsotopeModel
,
SpectrumAlignmentScore
,
ParentPeakMower
,
BinnedRepMutualInformation
createDB() :
DBAdapter
createEditor() :
ParamEditorDelegate
createIfNotExists_() :
MetaInfoInterface
createIntensityDistribution_() :
Spectrum3DWidget
,
SpectrumWidget
,
Spectrum2DWidget
,
Spectrum1DWidget
createModel() :
ModelDescription
createRandomPartitions() :
SVMWrapper
createSparseFile() :
File
currentLayerParamtersChanged_() :
Spectrum3DCanvas
,
SpectrumCanvas
,
Spectrum1DCanvas
,
Spectrum2DCanvas
currentPeakData_() :
SpectrumCanvas
curve() :
ROCCurve
cutoffNeg() :
ROCCurve
cutoffPos() :
ROCCurve
cvParam_() :
MzDataExpSettHandler
,
MzDataHandler
cvStringToEnum_() :
XMLHandler
Generated Tue Apr 1 15:36:41 2008 -- using doxygen 1.5.4
OpenMS / TOPP 1.1