#include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/SimpleSeeder.h>
This class simply sorts the peaks according to intensity and proposes the highest peak, which is not yet included in a feature, as next seed.
SimpleSeeder Parameters are explained on a separate page.
Public Types | |
typedef FeaFiModule< PeakType, FeatureType > | Base |
Public Member Functions | |
SimpleSeeder (const MSExperiment< PeakType > *map, FeatureMap< FeatureType > *features, FeatureFinder *ff) | |
Constructor. | |
virtual | ~SimpleSeeder () |
destructor | |
IndexPair | nextSeed () throw (NoSuccessor) |
return the next seed | |
Protected Member Functions | |
void | initialize_ () |
Protected Attributes | |
std::vector< IndexPair > | indices_ |
contains the indizes | |
std::vector< IndexPair > ::const_iterator | current_peak_ |
Points to the next peak in the peak vector. | |
bool | initialized_ |
Flag that indicates of the indices are initialized. | |
Private Member Functions | |
SimpleSeeder () | |
Not implemented. | |
SimpleSeeder & | operator= (const SimpleSeeder &) |
Not implemented. | |
SimpleSeeder (const SimpleSeeder &) | |
Not implemented. |
typedef FeaFiModule<PeakType,FeatureType> Base |
SimpleSeeder | ( | const MSExperiment< PeakType > * | map, | |
FeatureMap< FeatureType > * | features, | |||
FeatureFinder * | ff | |||
) | [inline] |
Constructor.
virtual ~SimpleSeeder | ( | ) | [inline, virtual] |
destructor
SimpleSeeder | ( | ) | [private] |
Not implemented.
SimpleSeeder | ( | const SimpleSeeder< PeakType, FeatureType > & | ) | [private] |
Not implemented.
IndexPair nextSeed | ( | ) | throw (NoSuccessor) [inline] |
return the next seed
void initialize_ | ( | ) | [inline, protected] |
SimpleSeeder& operator= | ( | const SimpleSeeder< PeakType, FeatureType > & | ) | [private] |
Not implemented.
std::vector<IndexPair>::const_iterator current_peak_ [protected] |
Points to the next peak in the peak vector.
bool initialized_ [protected] |
Flag that indicates of the indices are initialized.
Generated Tue Apr 1 15:36:48 2008 -- using doxygen 1.5.4 | OpenMS / TOPP 1.1 |