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BinnedRepSpectrumContrastAngle Class Reference
[Spectrum Comparison]

#include <OpenMS/COMPARISON/SPECTRA/BinnedRepSpectrumContrastAngle.h>

Inheritance diagram for BinnedRepSpectrumContrastAngle:

BinnedRepCompareFunctor FactoryProduct DefaultParamHandler

List of all members.


Detailed Description

calculates the spectral contrast angle between two spectra in bin representation

the functor does not cover the whole function, the normalization is done by the ClusterRun to allow for more flexibility. The SCA was defined by ???? in ????

Public Member Functions

 BinnedRepSpectrumContrastAngle ()
 standard constructor
 BinnedRepSpectrumContrastAngle (const BinnedRepSpectrumContrastAngle &source)
 copy constructor
virtual ~BinnedRepSpectrumContrastAngle ()
 destructor
BinnedRepSpectrumContrastAngleoperator= (const BinnedRepSpectrumContrastAngle &source)
 assignment operator
double operator() (const BinnedRep &a, const BinnedRep &b) const
 function call operator, calculates the similarity
double operator() (const BinnedRep &a) const
 function call operator, calculates the self similarity

Static Public Member Functions

static BinnedRepCompareFunctorcreate ()
static const String getProductName ()


Constructor & Destructor Documentation

BinnedRepSpectrumContrastAngle (  ) 

standard constructor

BinnedRepSpectrumContrastAngle ( const BinnedRepSpectrumContrastAngle source  ) 

copy constructor

virtual ~BinnedRepSpectrumContrastAngle (  )  [virtual]

destructor


Member Function Documentation

BinnedRepSpectrumContrastAngle& operator= ( const BinnedRepSpectrumContrastAngle source  ) 

assignment operator

double operator() ( const BinnedRep s1,
const BinnedRep s2 
) const [virtual]

function call operator, calculates the similarity

Implements BinnedRepCompareFunctor.

double operator() ( const BinnedRep a  )  const [virtual]

function call operator, calculates the self similarity

Implements BinnedRepCompareFunctor.

static BinnedRepCompareFunctor* create (  )  [inline, static]

static const String getProductName (  )  [inline, static]

Reimplemented from BinnedRepCompareFunctor.


The documentation for this class was generated from the following file:
Generated Tue Apr 1 15:36:43 2008 -- using doxygen 1.5.4 OpenMS / TOPP 1.1