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DelaunayPairFinder Parameters

Parameters of DelaunayPairFinder:

NameTypeDefaultRestrictionsDescription
similarity:max_pair_distance:RTfloat20 Consider element el_1 of a map map_1 and element el_2 el_2 of a different map map_2. Then el_1 is assigned to el_2 if they are nearest neighbors and if all other elements in map_1 have a distance greater max_pair_distance::RT to el_2 as well as all other elements in map_2 have a distance greater max_pair_distance::RT to el_1.
similarity:max_pair_distance:MZfloat1 Consider element el_1 of a map map_1 and element el_2 el_2 of a different map map_2. Then el_1 is assigned to el_2 if they are nearest neighbors and if all other elements in map_1 have a distance greater max_pair_distance::MZ to el_2 as well as all other elements in map_2 have a distance greater max_pair_distance::MZ to el_1.
similarity:precision:RTfloat60 Maximal deviation in RT of two elements in different maps to be considered as a corresponding element.
similarity:precision:MZfloat0.5 Maximal deviation in m/z of two elements in different maps to be considered as a corresponding element.
similarity:diff_intercept:RTfloat1 Factor for RT position used to balance the influence of RT and m/z deviations
similarity:diff_intercept:MZfloat0.01 Factor for m/z position used to balance the influence of RT and m/z deviations

Note:


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