Home  · Classes  · Annotated Classes  · Modules  · Members  · Namespaces  · Related Pages

TICFilter.h (Maintainer: Andreas Bertsch)

Go to the documentation of this file.
00001 // -*- Mode: C++; tab-width: 2; -*-
00002 // vi: set ts=2:
00003 //
00004 // --------------------------------------------------------------------------
00005 //                   OpenMS Mass Spectrometry Framework
00006 // --------------------------------------------------------------------------
00007 //  Copyright (C) 2003-2008 -- Oliver Kohlbacher, Knut Reinert
00008 //
00009 //  This library is free software; you can redistribute it and/or
00010 //  modify it under the terms of the GNU Lesser General Public
00011 //  License as published by the Free Software Foundation; either
00012 //  version 2.1 of the License, or (at your option) any later version.
00013 //
00014 //  This library is distributed in the hope that it will be useful,
00015 //  but WITHOUT ANY WARRANTY; without even the implied warranty of
00016 //  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
00017 //  Lesser General Public License for more details.
00018 //
00019 //  You should have received a copy of the GNU Lesser General Public
00020 //  License along with this library; if not, write to the Free Software
00021 //  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
00022 //
00023 // --------------------------------------------------------------------------
00024 // $Maintainer: Andreas Bertsch $
00025 // --------------------------------------------------------------------------
00026 //
00027 #ifndef OPENMS_FILTERING_TRANSFORMERS_TICFILTER_H
00028 #define OPENMS_FILTERING_TRANSFORMERS_TICFILTER_H
00029 
00030 #include <OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h>
00031 
00032 namespace OpenMS
00033 {
00041   class TICFilter : public FilterFunctor
00042   {
00043   public:
00044 
00045     // @name Constructors and Destructors
00046     // @{
00048     TICFilter();
00049 
00051     TICFilter(const TICFilter& source);
00052 
00054     virtual ~TICFilter();
00055     // @}
00056 
00057     // @name Operators
00058     // @{
00060     TICFilter& operator=(const TICFilter& source);
00061     // @}
00062 
00063     // @name Accessors
00064     // @{
00066     static FilterFunctor* create() { return new TICFilter(); }
00067 
00069     template <typename SpectrumType> double apply(SpectrumType& spectrum)
00070     {
00071       typedef typename SpectrumType::ConstIterator ConstIterator;
00072       double TIC = 0;
00073       //double window = (double)param_.getValue("window");
00074       
00075       for (ConstIterator it = spectrum.begin(); it != spectrum.end();++it )
00076       {
00077         TIC += it->getIntensity();
00078       }
00079       return TIC;
00080     }
00081 
00083     static const String getProductName()
00084     {
00085       return "TICFilter";
00086     }
00087     // @}
00088 
00089   };
00090 }
00091 #endif //OPENMS_FILTERING_TRANSFORMERS_TICFILTER_H
00092 

Generated Tue Apr 1 15:36:38 2008 -- using doxygen 1.5.4 OpenMS / TOPP 1.1