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ProteinIdentificationVisualizer.h (Maintainer: Marc Sturm)

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00001 // -*- Mode: C++; tab-width: 2; -*-
00002 // vi: set ts=2:
00003 //
00004 // --------------------------------------------------------------------------
00005 //                   OpenMS Mass Spectrometry Framework
00006 // --------------------------------------------------------------------------
00007 //  Copyright (C) 2003-2008 -- Oliver Kohlbacher, Knut Reinert
00008 //
00009 //  This library is free software; you can redistribute it and/or
00010 //  modify it under the terms of the GNU Lesser General Public
00011 //  License as published by the Free Software Foundation; either
00012 //  version 2.1 of the License, or (at your option) any later version.
00013 //
00014 //  This library is distributed in the hope that it will be useful,
00015 //  but WITHOUT ANY WARRANTY; without even the implied warranty of
00016 //  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
00017 //  Lesser General Public License for more details.
00018 //
00019 //  You should have received a copy of the GNU Lesser General Public
00020 //  License along with this library; if not, write to the Free Software
00021 //  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
00022 //
00023 // --------------------------------------------------------------------------
00024 // $Maintainer: Marc Sturm $
00025 // --------------------------------------------------------------------------
00026  
00027 #ifndef OPENMS_VISUAL_VISUALIZER_PROTEINIDENTIFICATIONVISUALIZER_H
00028 #define OPENMS_VISUAL_VISUALIZER_PROTEINIDENTIFICATIONVISUALIZER_H
00029 
00030 //OpenMS
00031 #include <OpenMS/METADATA/ProteinIdentification.h>
00032 #include <OpenMS/VISUAL/VISUALIZER/BaseVisualizer.h>
00033 
00034 class QLineEdit;
00035 class QComboBox;
00036 
00037 namespace OpenMS
00038 {
00039   class MSMetaDataExplorer;
00040 
00046   class ProteinIdentificationVisualizer : public BaseVisualizer
00047   {
00048     Q_OBJECT
00049 
00050   public: 
00052     ProteinIdentificationVisualizer(bool editable= FALSE, QWidget *parent =0, MSMetaDataExplorer *caller=0);
00053   
00055     void load(ProteinIdentification &s, int tree_item_id);
00056     
00057   private slots:
00059     void store_();
00061     void reject_();
00069     void updateTree_();
00070     
00071   private:  
00073     ProteinIdentification *ptr_;
00075     ProteinIdentification  tempidentification_;
00077     MSMetaDataExplorer *pidv_caller_;
00079     int tree_id_;
00080     
00082 
00083     QLineEdit* engine_;
00084     QLineEdit* engine_version_;
00085     QLineEdit* identification_date_;
00086     QLineEdit* identification_threshold_;
00087     QLineEdit* identifier_;
00088     QLineEdit* score_type_;
00089     QComboBox* higher_better_;
00090     
00091     QLineEdit* db_;
00092     QLineEdit* db_version_;
00093     QLineEdit* taxonomy_;
00094     QLineEdit* charges_;
00095     QLineEdit* missed_cleavages_;
00096     QLineEdit* peak_tolerance_;
00097     QLineEdit* precursor_tolerance_;
00098     QComboBox* mass_type_;
00099     QComboBox* enzyme_;
00101 
00103     QLineEdit* filter_threshold_;
00104 
00105   };
00106 }
00107 #endif //OPENMS_VISUAL_VISUALIZER_PROTEINIDENTIFICATIONVISUALIZER_H

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