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TwoDOptimization Parameters

Parameters of TwoDOptimization:

NameTypeDefaultRestrictionsDescription
delta_abs_errorfloat1e-05 if the absolute error gets smaller than this value the fitting is stopped.
delta_rel_errorfloat1e-05 if the relative error gets smaller than this value the fitting is stopped.
iterationsint10 maximal number of iterations for the fitting step
penalties:positionfloat0 If the position changes more than 0.2Da during the fitting it can be penalized
penalties:heightfloat1 penalty term for the fitting of the intensity:If it gets negative during the fitting it can be penalized.
penalties:left_widthfloat0 penalty term for the fitting of the left width:If the left width gets too broad or negative during the fitting it can be penalized.
penalties:right_widthfloat0 penalty term for the fitting of the right width:If the right width gets too broad or negative during the fitting it can be penalized.
2d:tolerance_mzfloat2.2 mz tolerance for cluster construction
2d:max_peak_distancefloat1.2 maximal peak distance in mz in a cluster

Note:


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