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PTMXMLFile.h (Maintainer: Martin Langwisch)

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00001 // -*- Mode: C++; tab-width: 2; -*-
00002 // vi: set ts=2:
00003 //
00004 // --------------------------------------------------------------------------
00005 //                   OpenMS Mass Spectrometry Framework
00006 // --------------------------------------------------------------------------
00007 //  Copyright (C) 2003-2008 -- Oliver Kohlbacher, Knut Reinert
00008 //
00009 //  This library is free software; you can redistribute it and/or
00010 //  modify it under the terms of the GNU Lesser General Public
00011 //  License as published by the Free Software Foundation; either
00012 //  version 2.1 of the License, or (at your option) any later version.
00013 // 
00014 //  This library is distributed in the hope that it will be useful,
00015 //  but WITHOUT ANY WARRANTY; without even the implied warranty of
00016 //  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
00017 //  Lesser General Public License for more details.
00018 //
00019 //  You should have received a copy of the GNU Lesser General Public
00020 //  License along with this library; if not, write to the Free Software
00021 //  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
00022 //
00023 // --------------------------------------------------------------------------
00024 // $Maintainer: Martin Langwisch $
00025 // --------------------------------------------------------------------------
00026 
00027 #ifndef OPENMS_FORMAT_PTMXMLFILE_H
00028 #define OPENMS_FORMAT_PTMXMLFILE_H
00029 
00030 #include <OpenMS/METADATA/ProteinIdentification.h>
00031 #include <OpenMS/FORMAT/XMLFile.h>
00032 
00033 
00034 #include <vector>
00035 
00036 namespace OpenMS 
00037 {
00046   class PTMXMLFile
00047     : public Internal::XMLFile
00048   {
00049     public:
00051       PTMXMLFile();
00052       
00058       void load(const String& filename, std::map< String, std::pair< String, String > >& ptm_informations) throw (Exception::FileNotFound, Exception::ParseError);
00059       
00065       void store(String filename, std::map< String, std::pair< String, String > >& ptm_informations) const throw (Exception::UnableToCreateFile);
00066   };
00067  
00068 } // namespace OpenMS
00069 
00070 #endif // OPENMS_FORMAT_PTMXMLFILE_H

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