00001 // -*- Mode: C++; tab-width: 2; -*- 00002 // vi: set ts=2: 00003 // 00004 // -------------------------------------------------------------------------- 00005 // OpenMS Mass Spectrometry Framework 00006 // -------------------------------------------------------------------------- 00007 // Copyright (C) 2003-2008 -- Oliver Kohlbacher, Knut Reinert 00008 // 00009 // This library is free software; you can redistribute it and/or 00010 // modify it under the terms of the GNU Lesser General Public 00011 // License as published by the Free Software Foundation; either 00012 // version 2.1 of the License, or (at your option) any later version. 00013 // 00014 // This library is distributed in the hope that it will be useful, 00015 // but WITHOUT ANY WARRANTY; without even the implied warranty of 00016 // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 00017 // Lesser General Public License for more details. 00018 // 00019 // You should have received a copy of the GNU Lesser General Public 00020 // License along with this library; if not, write to the Free Software 00021 // Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA 00022 // 00023 // -------------------------------------------------------------------------- 00024 // $Maintainer: Clemens Groepl, Marcel Grunert $ 00025 // -------------------------------------------------------------------------- 00026 00027 00028 #ifndef OPENMS_TRANSFORMATIONS_FEATUREFINDER_EMGMODEL_H 00029 #define OPENMS_TRANSFORMATIONS_FEATUREFINDER_EMGMODEL_H 00030 00031 #include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h> 00032 #include <OpenMS/MATH/STATISTICS/BasicStatistics.h> 00033 00034 00035 namespace OpenMS 00036 { 00044 class EmgModel 00045 : public InterpolationModel 00046 { 00047 00048 public: 00049 typedef InterpolationModel::CoordinateType CoordinateType; 00050 typedef Math::BasicStatistics<CoordinateType > BasicStatistics; 00051 00053 EmgModel(); 00054 00056 EmgModel(const EmgModel& source); 00057 00059 virtual ~EmgModel(); 00060 00062 virtual EmgModel& operator = (const EmgModel& source); 00063 00065 static BaseModel<1>* create() 00066 { 00067 return new EmgModel(); 00068 } 00069 00071 static const String getProductName() 00072 { 00073 return "EmgModel"; 00074 } 00075 00077 void setOffset(CoordinateType offset); 00078 00080 void setSamples(); 00081 00083 CoordinateType getCenter() const; 00084 00085 protected: 00086 CoordinateType min_; 00087 CoordinateType max_; 00088 BasicStatistics statistics_; 00089 CoordinateType height_; 00090 CoordinateType width_; 00091 CoordinateType symmetry_; 00092 CoordinateType retention_; 00093 00094 void updateMembers_(); 00095 }; 00096 } 00097 00098 #endif // OPENMS_TRANSFORMATIONS_FEATUREFINDER_EMGMODEL_H
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