00001 // -*- Mode: C++; tab-width: 2; -*- 00002 // vi: set ts=2: 00003 // 00004 // -------------------------------------------------------------------------- 00005 // OpenMS Mass Spectrometry Framework 00006 // -------------------------------------------------------------------------- 00007 // Copyright (C) 2003-2008 -- Oliver Kohlbacher, Knut Reinert 00008 // 00009 // This library is free software; you can redistribute it and/or 00010 // modify it under the terms of the GNU Lesser General Public 00011 // License as published by the Free Software Foundation; either 00012 // version 2.1 of the License, or (at your option) any later version. 00013 // 00014 // This library is distributed in the hope that it will be useful, 00015 // but WITHOUT ANY WARRANTY; without even the implied warranty of 00016 // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 00017 // Lesser General Public License for more details. 00018 // 00019 // You should have received a copy of the GNU Lesser General Public 00020 // License along with this library; if not, write to the Free Software 00021 // Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA 00022 // 00023 // -------------------------------------------------------------------------- 00024 // $Maintainer: Andreas Bertsch $ 00025 // -------------------------------------------------------------------------- 00026 // 00027 #ifndef OPENMS_FILTERING_TRANSFORMERS_TICFILTER_H 00028 #define OPENMS_FILTERING_TRANSFORMERS_TICFILTER_H 00029 00030 #include <OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h> 00031 00032 namespace OpenMS 00033 { 00041 class TICFilter : public FilterFunctor 00042 { 00043 public: 00044 00045 // @name Constructors and Destructors 00046 // @{ 00048 TICFilter(); 00049 00051 TICFilter(const TICFilter& source); 00052 00054 virtual ~TICFilter(); 00055 // @} 00056 00057 // @name Operators 00058 // @{ 00060 TICFilter& operator=(const TICFilter& source); 00061 // @} 00062 00063 // @name Accessors 00064 // @{ 00066 static FilterFunctor* create() { return new TICFilter(); } 00067 00069 template <typename SpectrumType> double apply(SpectrumType& spectrum) 00070 { 00071 typedef typename SpectrumType::ConstIterator ConstIterator; 00072 double TIC = 0; 00073 //double window = (double)param_.getValue("window"); 00074 00075 for (ConstIterator it = spectrum.begin(); it != spectrum.end();++it ) 00076 { 00077 TIC += it->getIntensity(); 00078 } 00079 return TIC; 00080 } 00081 00083 static const String getProductName() 00084 { 00085 return "TICFilter"; 00086 } 00087 // @} 00088 00089 }; 00090 } 00091 #endif //OPENMS_FILTERING_TRANSFORMERS_TICFILTER_H 00092
Generated Tue Apr 1 15:36:38 2008 -- using doxygen 1.5.4 | OpenMS / TOPP 1.1 |