const_weights_ | SequestOutfile | [private, static] |
delta_cn_weights_ | SequestOutfile | [private, static] |
delta_mass_weights_ | SequestOutfile | [private, static] |
getACAndACType(String line, String &accession, String &accession_type) | SequestOutfile | |
getColumns(const String &line, std::vector< String > &substrings, UInt number_of_columns, UInt reference_column) | SequestOutfile | |
getSequences(const String &database_filename, const std::map< String, UInt > &ac_position_map, std::vector< String > &sequences, std::vector< std::pair< String, UInt > > &found, std::map< String, UInt > ¬_found) | SequestOutfile | |
load(const String &result_filename, std::vector< PeptideIdentification > &peptide_identifications, ProteinIdentification &protein_identification, const Real p_value_threshold, std::vector< Real > &pvalues, const String &database="") | SequestOutfile | |
max_pep_lens_ | SequestOutfile | [private, static] |
num_frags_ | SequestOutfile | [private, static] |
operator=(const SequestOutfile &sequest_outfile) | SequestOutfile | |
operator==(const SequestOutfile &sequest_outfile) const | SequestOutfile | |
rank_sp_weights_ | SequestOutfile | [private, static] |
readOutHeader(const String &result_filename, DateTime &datetime, Real &precursor_mz_value, Int &charge, UInt &precursor_mass_type, UInt &ion_mass_type, UInt &displayed_peptides, String &sequest, String &sequest_version, String &database_type, Int &number_column, Int &rank_sp_column, Int &id_column, Int &mh_column, Int &delta_cn_column, Int &xcorr_column, Int &sp_column, Int &sf_column, Int &ions_column, Int &reference_column, Int &peptide_column, Int &score_column, UInt &number_of_columns) | SequestOutfile | |
SequestOutfile() | SequestOutfile | |
SequestOutfile(const SequestOutfile &sequest_outfile) | SequestOutfile | |
xcorr_weights_ | SequestOutfile | [private, static] |
~SequestOutfile() | SequestOutfile | [virtual] |
Generated Tue Apr 1 15:36:45 2008 -- using doxygen 1.5.4 | OpenMS / TOPP 1.1 |