00001 // -*- Mode: C++; tab-width: 2; -*- 00002 // vi: set ts=2: 00003 // 00004 // -------------------------------------------------------------------------- 00005 // OpenMS Mass Spectrometry Framework 00006 // -------------------------------------------------------------------------- 00007 // Copyright (C) 2003-2008 -- Oliver Kohlbacher, Knut Reinert 00008 // 00009 // This library is free software; you can redistribute it and/or 00010 // modify it under the terms of the GNU Lesser General Public 00011 // License as published by the Free Software Foundation; either 00012 // version 2.1 of the License, or (at your option) any later version. 00013 // 00014 // This library is distributed in the hope that it will be useful, 00015 // but WITHOUT ANY WARRANTY; without even the implied warranty of 00016 // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 00017 // Lesser General Public License for more details. 00018 // 00019 // You should have received a copy of the GNU Lesser General Public 00020 // License along with this library; if not, write to the Free Software 00021 // Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA 00022 // 00023 // -------------------------------------------------------------------------- 00024 // $Maintainer: Clemens Groepl,Marcel Grunert $ 00025 // -------------------------------------------------------------------------- 00026 00027 #ifndef OPENMS_TRANSFORMATIONS_FEATUREFINDER_LMAGAUSSMODEL_H 00028 #define OPENMS_TRANSFORMATIONS_FEATUREFINDER_LMAGAUSSMODEL_H 00029 00030 #include <OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h> 00031 #include <OpenMS/MATH/STATISTICS/BasicStatistics.h> 00032 00033 00034 namespace OpenMS 00035 { 00036 00046 class LmaGaussModel 00047 : public InterpolationModel 00048 { 00049 00050 public: 00051 typedef InterpolationModel::CoordinateType CoordinateType; 00052 typedef Math::BasicStatistics<CoordinateType > BasicStatistics; 00053 00055 LmaGaussModel(); 00056 00058 LmaGaussModel(const LmaGaussModel& source); 00059 00061 virtual ~LmaGaussModel(); 00062 00064 virtual LmaGaussModel& operator = (const LmaGaussModel& source); 00065 00067 static BaseModel<1>* create() 00068 { 00069 return new LmaGaussModel(); 00070 } 00071 00073 static const String getProductName() 00074 { 00075 return "LmaGaussModel"; 00076 } 00077 00079 void setOffset(CoordinateType offset); 00080 00082 void setSamples(); 00083 00085 CoordinateType getCenter() const; 00086 00087 protected: 00088 CoordinateType min_; 00089 CoordinateType max_; 00090 BasicStatistics statistics_; 00091 CoordinateType scale_factor_; 00092 CoordinateType standard_deviation_; 00093 CoordinateType expected_value_; 00094 00095 void updateMembers_(); 00096 }; 00097 } 00098 00099 #endif // OPENMS_TRANSFORMATIONS_FEATUREFINDER_LMAGAUSSMODEL_H
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