Name | Type | Default | Restrictions | Description |
window_size | float | 2 | | The size of the m/z window where the peaks are removed, +/- window_size. |
default_charge | int | 2 | | If the precursor has no charge set, the default charge is assumed. |
clean_all_charge_states | int | 1 | | Set to 1 if precursor ions of all possible charge states should be removed. |
consider_NH3_loss | int | 1 | | Whether NH3 loss peaks from the precursor should be removed. |
consider_H2O_loss | int | 1 | | Whether H2O loss peaks from the precursor should be removed. |
reduce_by_factor | int | 0 | | Reduce the intensities of the precursor and related ions by a given factor (set 'set_to_zero' to 0). |
factor | float | 1000 | | Factor which is used to reduce the intensities if 'reduce_by_factor' is selected. |
set_to_zero | int | 1 | | Reduce the intensities of the precursor and related ions to zero. |