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MascotInfile Member List

This is the complete list of members for MascotInfile, including all inherited members.

begin_ProgressLogger [mutable, protected]
boundary_MascotInfile [protected]
charges_MascotInfile [protected]
cleavage_MascotInfile [protected]
CMD enum valueProgressLogger
db_MascotInfile [protected]
dlg_ProgressLogger [mutable, protected]
end_ProgressLogger [mutable, protected]
endProgress() const ProgressLogger
form_version_MascotInfile [protected]
getBoundary()MascotInfile
getCharges()MascotInfile
getCleavage()MascotInfile
getDB()MascotInfile
getFormVersion()MascotInfile
getHits()MascotInfile
getInstrument()MascotInfile
getMassType()MascotInfile
getMissedCleavages()MascotInfile
getModifications()MascotInfile
getNextSpectrum_(std::istream &is, std::vector< std::pair< double, double > > &spectrum, UInt &charge, double &precursor_mz, double &precursor_int, double &rt, String &title)MascotInfile [protected]
getPeakMassTolerance()MascotInfile
getPrecursorMassTolerance()MascotInfile
getSearchType()MascotInfile
getTaxonomy()MascotInfile
getVariableModifications()MascotInfile
GUI enum valueProgressLogger
hits_MascotInfile [protected]
instrument_MascotInfile [protected]
ion_mass_tolerance_MascotInfile [protected]
load(const String &filename, MapType &map)MascotInfile [inline]
LogType enum nameProgressLogger
MascotInfile()MascotInfile
mass_type_MascotInfile [protected]
missed_cleavages_MascotInfile [protected]
mods_MascotInfile [protected]
mz_MascotInfile [protected]
NONE enum valueProgressLogger
precursor_mass_tolerance_MascotInfile [protected]
ProgressLogger()ProgressLogger
retention_time_MascotInfile [protected]
search_title_MascotInfile [protected]
search_type_MascotInfile [protected]
setBoundary(const String &boundary)MascotInfile
setCharges(std::vector< Int > &charges)MascotInfile
setCleavage(const String &cleavage)MascotInfile
setDB(const String &db)MascotInfile
setFormVersion(const String &form_version)MascotInfile
setHits(const String &hits)MascotInfile
setInstrument(const String &instrument)MascotInfile
setLogType(LogType type) const ProgressLogger
setMassType(const String &mass_type)MascotInfile
setMissedCleavages(UInt missed_cleavages)MascotInfile
setModifications(const std::vector< String > &mods)MascotInfile
setPeakMassTolerance(Real ion_mass_tolerance)MascotInfile
setPrecursorMassTolerance(Real precursor_mass_tolerance)MascotInfile
setProgress(UInt value) const ProgressLogger
setSearchType(const String &search_type)MascotInfile
setTaxonomy(const String &taxonomy)MascotInfile
setVariableModifications(const std::vector< String > &mods)MascotInfile
startProgress(UInt begin, UInt end, const String &label) const ProgressLogger
store(const String &filename, const DPeakArray< Peak1D > &spec, DoubleReal mz, DoubleReal retention_time, String search_title)MascotInfile
store(const String &filename, const MSExperiment< Peak1D > &experiment, String search_title)MascotInfile
taxonomy_MascotInfile [protected]
type_ProgressLogger [mutable, protected]
value_ProgressLogger [mutable, protected]
variable_mods_MascotInfile [protected]
writeHeader_(FILE *fp)MascotInfile [protected]
writeMSExperiment_(FILE *fp, const String &filename, const MSExperiment< Peak1D > &experiment)MascotInfile [protected]
writeParameterHeader_(const String &name, FILE *fp, bool line_break=true)MascotInfile [protected]
writeSpectrum_(FILE *fp, const String &filename, const DPeakArray< Peak1D > &peaks)MascotInfile [protected]
~MascotInfile()MascotInfile [virtual]
~ProgressLogger()ProgressLogger


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