array_name_ | MzDataHandler | [protected] |
asBool_(const String &in) | XMLHandler | [inline, protected] |
asDateTime_(const String &in) | XMLHandler | [inline, protected] |
asDouble_(const String &in) | XMLHandler | [inline, protected] |
asFloat_(const String &in) | XMLHandler | [inline, protected] |
asInt_(const String &in) | XMLHandler | [inline, protected] |
asInt_(const XMLCh *in) | XMLHandler | [inline, protected] |
asUInt_(const String &in) | XMLHandler | [inline, protected] |
attributeAsDouble_(const xercesc::Attributes &a, const char *name) const | XMLHandler | [inline, protected] |
attributeAsDouble_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | [inline, protected] |
attributeAsInt_(const xercesc::Attributes &a, const char *name) const | XMLHandler | [inline, protected] |
attributeAsInt_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | [inline, protected] |
attributeAsString_(const xercesc::Attributes &a, const char *name) const | XMLHandler | [inline, protected] |
attributeAsString_(const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | [inline, protected] |
cexp_ | MzDataHandler | [protected] |
characters(const XMLCh *const chars, const unsigned int length) | MzDataHandler | [inline, virtual] |
cv_terms_ | XMLHandler | [protected] |
cvParam_(const String &name, const String &value) | MzDataHandler | [inline, protected] |
cvStringToEnum_(UInt section, const String &term, const char *message) | XMLHandler | [inline, protected] |
data_to_decode_ | MzDataHandler | [protected] |
data_to_encode_ | MzDataHandler | [protected] |
decoded_double_list_ | MzDataHandler | [protected] |
decoded_list_ | MzDataHandler | [protected] |
decoder_ | MzDataHandler | [protected] |
endElement(const XMLCh *const , const XMLCh *const , const XMLCh *const qname) | MzDataHandler | [inline, virtual] |
endians_ | MzDataHandler | [protected] |
equal_(const XMLCh *a, const XMLCh *b) | XMLHandler | [inline, protected] |
error(const xercesc::SAXParseException &exception) | XMLHandler | |
error(const String &msg, UInt line=0, UInt column=0) const | XMLHandler | |
error_message_ | XMLHandler | [mutable, protected] |
errorString() | XMLHandler | |
exp_ | MzDataHandler | [protected] |
exp_sett_ | MzDataHandler | [protected] |
fatalError(const xercesc::SAXParseException &exception) | XMLHandler | |
fatalError(const String &msg, UInt line=0, UInt column=0) const | XMLHandler | |
file_ | XMLHandler | [protected] |
fillData_() | MzDataHandler | [inline, protected] |
getDecodedValue_(UInt lindex, UInt vindex) | MzDataHandler | [inline, protected] |
in_description_ | MzDataHandler | [protected] |
logger_ | MzDataHandler | [protected] |
meta_id_ | MzDataHandler | [protected] |
MzDataHandler(MapType &exp, const String &filename, const String &version, ProgressLogger &logger) | MzDataHandler | [inline] |
MzDataHandler(const MapType &exp, const String &filename, const String &version, const ProgressLogger &logger) | MzDataHandler | [inline] |
MzDataHandler() | MzDataHandler | [private] |
open_tags_ | XMLHandler | [protected] |
optionalAttributeAsDouble_(DoubleReal &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | [inline, protected] |
optionalAttributeAsDouble_(DoubleReal &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | [inline, protected] |
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | [inline, protected] |
optionalAttributeAsInt_(Int &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | [inline, protected] |
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | [inline, protected] |
optionalAttributeAsString_(String &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | [inline, protected] |
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const char *name) const | XMLHandler | [inline, protected] |
optionalAttributeAsUInt_(UInt &value, const xercesc::Attributes &a, const XMLCh *name) const | XMLHandler | [inline, protected] |
options_ | MzDataHandler | [protected] |
peak_count_ | MzDataHandler | [protected] |
PeakType typedef | MzDataHandler | [protected] |
precisions_ | MzDataHandler | [protected] |
readPeakSupplementalData_(PeakType &, UInt) | MzDataHandler | [inline, protected] |
readPeakSupplementalData_(PickedPeak1D &peak, UInt n) | MzDataHandler | [inline] |
setOptions(const PeakFileOptions &opt) | MzDataHandler | [inline] |
skip_spectrum_ | MzDataHandler | [protected] |
sm_ | XMLHandler | [protected] |
spec_ | MzDataHandler | [protected] |
spec_write_counter_ | MzDataHandler | [protected] |
SpectrumType typedef | MzDataHandler | [protected] |
startElement(const XMLCh *const , const XMLCh *const , const XMLCh *const qname, const xercesc::Attributes &attributes) | MzDataHandler | [inline, virtual] |
version_ | XMLHandler | [protected] |
warning(const xercesc::SAXParseException &exception) | XMLHandler | |
warning(const String &msg, UInt line=0, UInt column=0) const | XMLHandler | |
writeBinary_(std::ostream &os, UInt size, const String &tag, const String &desc="", int id=-1) | MzDataHandler | [inline, protected] |
writeCVS_(std::ostream &os, DoubleReal value, const String &acc, const String &name, int indent=4) const | XMLHandler | [inline, protected] |
writeCVS_(std::ostream &os, const String &value, const String &acc, const String &name, int indent=4) const | XMLHandler | [inline, protected] |
writeCVS_(std::ostream &os, int value, int map, const String &acc, const String &name, int indent=4) | XMLHandler | [protected] |
writeDerivedPeakSupplementalData_(std::ostream &, ContainerType const &) | MzDataHandler | [inline, protected] |
writeDerivedPeakSupplementalData_(std::ostream &os, DPeakArray< PickedPeak1D > const &container) | MzDataHandler | [inline] |
writeTo(std::ostream &os) | MzDataHandler | [inline, virtual] |
writeUserParam_(std::ostream &os, const MetaInfoInterface &meta, int indent=4) | XMLHandler | [inline, protected] |
writeUserParam_(const String &tag_name, std::ostream &os, const MetaInfoInterface &meta, UInt indent) const | XMLHandler | [protected] |
XMLHandler(const String &filename, const String &version) | XMLHandler | |
~MzDataHandler() | MzDataHandler | [inline, virtual] |
~XMLHandler() | XMLHandler | [virtual] |