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Here is a list of all class members with links to the classes they belong to:
- r -
r_squared_ :
LinearRegression
r_value :
PeakShape
r_value_ :
PickedPeak1D
RADIALEJECTIONLINEARIONTRAP :
MassAnalyzer
radius_ :
PeakPickerCWT
random() :
String
RangeManager() :
RangeManager
RangeManagerType :
DSpectrum
,
FeatureMap
,
MSExperiment
rank_ :
PeptideHit
,
ProteinHit
rank_sp_weights_ :
SequestOutfile
ranked_() :
ConsensusID
raster() :
LinearResampler
rasterExperiment() :
LinearResampler
ratio_max :
FuzzyStringComparator
ratio_max_allowed :
FuzzyStringComparator
RAWDATA :
SpectrumSettings
RawDataArrayType :
EmgFitter1D::Data
,
Fitter1D
,
LmaGaussFitter1D::Data
,
LmaIsotopeFitter1D::Data
,
ModelFitter
,
PeakPickerCWT
RawDataPoint1D() :
RawDataPoint1D
RawDataPoint2D() :
RawDataPoint2D
RawDataPointConstIterator :
ContinuousWaveletTransform
,
ContinuousWaveletTransformNumIntegration
RawDataPointIterator :
Fitter1D
,
OptimizePeakDeconvolution
,
OptimizePick
,
PeakPickerCWT
,
PeakPickerCWT::PeakArea_
,
PeakShape
RawDataPointType :
InternalCalibration
,
TOFCalibration
,
EmgFitter1D::Data
,
Fitter1D
,
LmaGaussFitter1D::Data
,
LmaIsotopeFitter1D::Data
,
ModelFitter
,
PeakPickerCWT
,
PeakShape
RawDataVector :
OptimizePeakDeconvolution
,
OptimizePick
rbegin() :
DPeakConstReferenceArray
,
DSpectrum
readable() :
File
readElementsFromFile_() :
EmpiricalFormula
readFromFile_() :
ElementDB
readOutHeader() :
InspectOutfile
,
SequestOutfile
readPeakSupplementalData_() :
MzDataHandler
readResidueModificationsFromFile_() :
ResidueDB
readResiduesFromFile_() :
ResidueDB
reagent_name_ :
Modification
real_2D_ :
TwoDOptimization
RealType :
AsymmetricStatistics
,
BasicStatistics
recalculateAxes() :
SpectrumCanvas
recalculateAxes_() :
Spectrum1DWidget
,
Spectrum2DWidget
,
Spectrum3DWidget
,
SpectrumWidget
recalculateCapacity_() :
HashMap
recalculateDotGradient_() :
Spectrum2DCanvas
,
Spectrum3DOpenGLCanvas
recalculateRanges_() :
SpectrumCanvas
recalculateSnapFactor_() :
Spectrum1DCanvas
,
Spectrum2DCanvas
,
SpectrumCanvas
recent_actions_ :
TOPPViewBase
recent_as_new_layer_ :
TOPPViewBase
recent_files_ :
TOPPViewBase
record_length_ :
InspectOutfile
Reference :
Grid
,
Matrix
,
FeatureMap
reference :
Grid
,
Group
,
DPosition
,
HashMap::Iterator
,
HashMap::ConstIterator
,
HashMap
,
Matrix
,
AreaIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
,
DPeakConstReferenceArray
,
DSpectrum
,
ExternalAllocator
reference_map_index_ :
StarAlignment
reflectron_state_ :
MassAnalyzer
ReflectronState :
MassAnalyzer
REFLSTATENULL :
MassAnalyzer
refreshModificationList() :
ModifierRep
region_ :
SimpleExtender
registerChildren() :
BasePairFinder
,
BasePairwiseMapMatcher
,
BaseSuperimposer
,
PepIterator
,
BinnedRepCompareFunctor
,
PeakSpectrumCompareFunctor
,
FilterFunctor
,
PreprocessingFunctor
,
BaseModel
,
FeatureFinderAlgorithm
,
Fitter1D
,
BaseModel
registerDoubleOption_() :
TOPPBase
registeredProducts() :
Factory
registerFactory() :
SingletonRegistry
registerFlag_() :
TOPPBase
registerInputFile_() :
TOPPBase
registerIntOption_() :
TOPPBase
registerName() :
MetaInfoRegistry
registerOptionsAndFlags_() :
TOPPBase
registerOutputFile_() :
TOPPBase
registerProduct() :
Factory
registerStringOption_() :
TOPPBase
registerSubsection_() :
TOPPBase
registry() :
MetaInfo
registry_ :
MetaInfo
rehash_() :
HashMap
reject_() :
AcquisitionInfoVisualizer
,
AcquisitionVisualizer
,
BaseVisualizer
,
ContactPersonVisualizer
,
DigestionVisualizer
,
ExperimentalSettingsVisualizer
,
GradientVisualizer
,
HPLCVisualizer
,
InstrumentSettingsVisualizer
,
InstrumentVisualizer
,
IonDetectorVisualizer
,
IonSourceVisualizer
,
MassAnalyzerVisualizer
,
MetaInfoDescriptionVisualizer
,
MetaInfoVisualizer
,
ModificationVisualizer
,
PeptideHitVisualizer
,
PeptideIdentificationVisualizer
,
PrecursorVisualizer
,
ProcessingMethodVisualizer
,
ProteinHitVisualizer
,
ProteinIdentificationVisualizer
,
SampleVisualizer
,
SoftwareVisualizer
,
SourceFileVisualizer
,
SpectrumSettingsVisualizer
,
TaggingVisualizer
rel_error_ :
LevMarqFitter1D
remove() :
Param
,
String
,
DataFilters
,
File
,
MultiGradient
remove_() :
MetaInfoVisualizer
remove_precursor_near_peaks_ :
SequestInfile
removebutton_ :
GradientVisualizer
removeData_() :
GradientVisualizer
removeLayer() :
Spectrum1DCanvas
,
Spectrum2DCanvas
,
Spectrum3DCanvas
,
SpectrumCanvas
removeMetaValue() :
MetaInfoInterface
removeTab() :
TOPPViewBase
removeTreatment() :
Sample
removeValue() :
MetaInfo
removeWhitespaces() :
String
rend() :
DPeakConstReferenceArray
,
DSpectrum
render() :
DBConnection
renormalize() :
IsotopeDistribution
replace() :
DataFilters
report_failure_() :
FuzzyStringComparator
report_success_() :
FuzzyStringComparator
required :
TOPPBase::ParameterInformation
RequiredParameterNotGiven() :
RequiredParameterNotGiven
reserve() :
DPeakConstReferenceArray
RESERVOIR :
IonSource
reset() :
MSExperiment
,
Histogram
,
StopWatch
resetErrors() :
XMLValidator
resetTranslation() :
Spectrum3DOpenGLCanvas
resetZoom() :
TOPPViewBase
,
SpectrumCanvas
residual_() :
EmgFitter1D
,
LmaIsotopeFitter1D
,
LmaGaussFitter1D
Residue() :
Residue
residue_names_ :
ResidueDB
ResidueConstIterator :
ResidueDB
ResidueDB() :
ResidueDB
ResidueIterator :
ResidueDB
ResidueModification() :
ResidueModification
ResidueModificationConstIterator :
ResidueDB
ResidueModificationIterator :
ResidueDB
residues_ :
ResidueDB
residues_in_upper_case_ :
SequestInfile
ResidueType :
Residue
resize() :
MSExperiment
,
Matrix
,
DPeakConstReferenceArray
,
DSpectrum
,
SparseVector
resizeEvent() :
Spectrum3DCanvas
,
SpectrumCanvas
,
HistogramWidget
resizeGL() :
Spectrum3DOpenGLCanvas
RESMETHNULL :
MassAnalyzer
resolution_ :
IonDetector
,
MassAnalyzer
resolution_method_ :
MassAnalyzer
resolution_type_ :
MassAnalyzer
ResolutionMethod :
MassAnalyzer
ResolutionType :
MassAnalyzer
restoreRotationAndZoom() :
Spectrum3DOpenGLCanvas
RESTYPENULL :
MassAnalyzer
result_ :
DBSpectrumSelectorDialog
result_type :
DelaunayPairFinder::GeometricTraits::Construct_center_2
retention_ :
EmgModel
,
BinnedRep
,
EmgFitter1D
retention_time_ :
MascotInfile
,
DSpectrum
reverse() :
String
reverse_ :
InMzRange
,
InIntensityRange
,
HasScanMode
,
InRTRange
,
InMSLevelRange
,
IsEmptySpectrum
reverse_iterator :
Group
,
HashMap
,
DSpectrum
,
Grid
,
Matrix
,
DPeakConstReferenceArray
ReverseComparator() :
ReverseComparator
reverseComparator() :
ReverseComparator
ReverseComparator() :
ReverseComparator
ReverseIterator :
Grid
,
Matrix
,
TextFile
,
String
,
FeatureMap
,
DSpectrum
,
HashMap
,
DPeakArray
,
ConsensusMap
,
DPeakConstReferenceArray
RIGHT :
AxisWidget
right :
PeakPickerCWT::PeakArea_
right_endpoint :
PeakShape
right_splitter_ :
HistogramWidget
right_width :
PeakShape
right_width_paramter_ :
PickedPeak1D
ROCCurve() :
ROCCurve
root_ :
Param
,
Param::ParamIterator
row_ :
DataTable
rowIndex() :
Matrix
rows() :
Matrix
rows_ :
Matrix
rsd_ :
LinearRegression
RT :
IsotopeWaveletTransform::BoxElement_
,
RawDataPoint2D
,
BaseSuperimposer
,
ModelFitter
rt_hash_ :
PoseClusteringAffineSuperimposer
RT_index :
IsotopeWaveletTransform::BoxElement_
rt_input_data_ :
ModelFitter
rt_label_ :
TOPPViewBase
rt_range_ :
PeakFileOptions
rt_stat_ :
ModelFitter
RTBegin() :
MSExperiment
RTEnd() :
MSExperiment
RtIterator() :
RtIterator
RTIterator_ :
LayerStatisticsDialog
rubber_band_ :
SpectrumCanvas
run() :
BaseSuperimposer
,
FeatureFinderAlgorithm
,
PairMatcher
,
FeatureFinderAlgorithmSimple
,
FeatureFinderAlgorithmSimplest
,
PoseClusteringPairwiseMapMatcher
,
PoseClusteringAffineSuperimposer
,
BaseAlignment
,
PoseClusteringShiftSuperimposer
,
FeatureFinder
,
StarAlignment
,
BasePairwiseMapMatcher
,
FeatureFinderAlgorithmPicked
running_avg_ :
SimpleExtender
rWidth :
PenaltyFactors
Generated Tue Apr 1 15:36:41 2008 -- using doxygen 1.5.4
OpenMS / TOPP 1.1