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ok() :
DBSpectrumSelectorDialog
ok_() :
ToolsDialog
OMSSAXMLFile() :
OMSSAXMLFile
OMSSAXMLHandler() :
OMSSAXMLHandler
op_changed_() :
DataFilterDialog
open() :
SuffixArraySeqan
,
SuffixArrayTrypticCompressed
,
SuffixArray
openAsLayer() :
ToolsDialog
openAsWindow() :
ToolsDialog
OpenDialog() :
OpenDialog
openFile() :
INIFileEditorWindow
openglwidget() :
Spectrum3DCanvas
OpenMS_getFileBlocksize() :
MemoryMap
OpenMS_mmap() :
MemoryMap
OpenMS_unmap() :
MemoryMap
openPreferences() :
SpectrumWidget
openRecentFile() :
TOPPViewBase
openSpectrumDialog() :
TOPPViewBase
operator *() :
FastaIterator
,
FastaIteratorIntern
,
AreaIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
,
IntensityIterator
,
MzIterator
,
RtIterator
,
EdwardsLippertIterator
,
IsotopeDistribution
,
PepIterator
,
TrypticIterator
,
DPosition
,
HashMap::Iterator
,
HashMap::ConstIterator
,
Param::ParamIterator
,
SparseVector::SparseVectorIterator
,
SparseVector::SparseVectorConstIterator
operator *=() :
IsotopeDistribution
,
DPosition
operator double() :
SparseVector::DoubleProxy
operator DoubleReal() :
DataValue
operator Int() :
DataValue
operator Real() :
DataValue
operator std::string() :
DataValue
operator UInt() :
DataValue
operator!=() :
HashMap::Iterator
,
HashMap::ConstIterator
,
HashMap
,
Param::ParamIterator
,
SparseVector::SparseVectorIterator
,
SparseVector::SparseVectorConstIterator
,
DataFilters::DataFilter
,
AreaIterator
,
DPeak
,
DPeakArray
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray
,
DRawDataPoint
,
DSpectrum
,
FeatureMap
,
MSExperiment
,
MSSpectrum
,
Peak1D
,
Peak2D
,
PickedPeak1D
,
RangeManager
,
RawDataPoint1D
,
RawDataPoint2D
,
Histogram
,
Acquisition
,
AcquisitionInfo
,
ContactPerson
,
ExperimentalSettings
,
Gradient
,
HPLC
,
Instrument
,
ElementPair
,
InstrumentSettings
,
IonDetector
,
Group
,
IonSource
,
MassAnalyzer
,
IndexTuple
,
MetaInfo
,
MetaInfoInterface
,
LinearMapping
,
PeptideHit
,
PeptideIdentification
,
AASequence
,
Precursor
,
ProcessingMethod
,
AASequence
,
ProteinHit
,
ProteinIdentification::SearchParameters
,
Element
,
ProteinIdentification
,
Software
,
EmpiricalFormula
,
SourceFile
,
SpectrumSettings
,
EmpiricalFormula
,
StopWatch
,
ModelDescription
,
IsotopeDistribution
,
Residue
,
ResidueDB
,
ResidueModification
,
DIntervalBase
,
DPosition
operator()() :
PeakSpectrumCompareFunctor
,
SpectrumAlignmentScore
,
SpectrumCheapDPCorr
,
SpectrumPrecursorComparator
,
ZhangSimilarityScore
,
HashFunction
,
Matrix
,
PointerComparator
,
ReverseComparator
,
LexicographicComparator
,
DRawDataPoint::IntensityLess
,
DRawDataPoint::NthPositionLess
,
DRawDataPoint::PositionLess
,
Feature::OverallQualityLess
,
MSSpectrum::RTLess
,
PickedPeak1D
,
PickedPeak1D::WidthLess
,
InRTRange
,
InMSLevelRange
,
HasScanMode
,
IsEmptySpectrum
,
InMzRange
,
InIntensityRange
,
RawDataPoint1D::IntensityLess
,
RawDataPoint1D::PositionLess
,
RawDataPoint2D::IntensityLess
,
RawDataPoint2D::NthPositionLess
,
RawDataPoint2D::PositionLess
,
ROCCurve::simsortdec
,
PeptideHit::ScoreMore
,
PeptideHit::ScoreLess
,
IntensityLess
,
SimpleExtender::IndexWithPriority::PriorityLess
,
PeakShape
,
PeakShape::PositionLess
,
TwoDOptimization::IndexLess
,
DelaunayPairFinder::GeometricTraits::Construct_center_2
,
IndexTuple::IndexLess
,
PairMatcher::Comparator
,
BinnedRepCompareFunctor
,
BinnedRepMutualInformation
,
BinnedRepSharedPeakCount
,
BinnedRepSpectrumContrastAngle
,
BinnedRepSumAgreeingIntensities
,
PeakSpectrumCompareFunctor
operator+() :
AASequence
,
EmpiricalFormula
,
IsotopeDistribution
,
DPosition
,
String
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
operator++() :
EdwardsLippertIterator
,
PepIterator
,
TrypticIterator
,
HashMap::Iterator
,
HashMap::ConstIterator
,
Param::ParamIterator
,
SparseVector::SparseVectorIterator
,
SparseVector::SparseVectorConstIterator
,
FastaIterator
,
FastaIteratorIntern
,
AreaIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
operator+=() :
String
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
,
AASequence
,
EmpiricalFormula
,
IsotopeDistribution
,
DPosition
,
String
operator-() :
EmpiricalFormula
,
DPosition
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
operator--() :
HashMap::ConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
operator-=() :
EmpiricalFormula
,
DPosition
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
operator->() :
HashMap::Iterator
,
HashMap::ConstIterator
,
Param::ParamIterator
,
AreaIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
operator/=() :
DPosition
operator<() :
PreciseTime
,
TimeStamp
,
DPosition
,
Matrix
,
DPeakArray
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray
,
DSpectrum
,
StopWatch
,
FeatureFinderAlgorithmPicked::Seed
operator<<() :
StringList
,
DBoundingBox
,
Matrix
operator<=() :
DPosition
,
DPeakArray
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray
,
DSpectrum
,
StopWatch
operator=() :
SpectrumPrecursorComparator
,
SpectrumCheapDPCorr
,
ZhangSimilarityScore
,
SpectrumAlignment
,
IntensityBalanceFilter
,
AreaIterator
,
IsotopeDiffFilter
,
BinnedRepSharedPeakCount
,
IsotopeMarker
,
Param
,
FilterFunctor
,
BinnedRep
,
SignalToNoiseEstimatorMedian
,
ComplementFilter
,
SparseVector::DoubleProxy
,
Residue
,
StringList
,
SignalToNoiseEstimator
,
SparseVector::DoubleProxy
,
ElementDB
,
FuzzyStringComparator
,
ConvexHull2D
,
HashMap
,
PoseClusteringShiftSuperimposer::Shift
,
DRange
,
DataValue
,
DefaultParamHandler
,
Group
,
DPosition
,
Date
,
TimeStamp
,
FeatureDecharger
,
ConsensusID
,
PILISScoring
,
ProtonDistributionModel
,
DelaunayPairFinder::Point
,
ElementPair
,
Grid
,
GridCell
,
IndexTuple
,
LinearMapping
,
PairMatcher
,
ExtendedIsotopeModel
,
MaxLikeliFitter1D
,
PeakShape
,
TOPPBase::ParameterInformation
,
AASequence
,
Element
,
EmpiricalFormula
,
IsotopeDistribution
,
ResidueDB
,
ResidueModification
,
TheoreticalSpectrumGenerator
,
HierarchicalClustering
,
BinnedRepCompareFunctor
,
BinnedRepMutualInformation
,
ModelDescription
,
BinnedRepSpectrumContrastAngle
,
BinnedRepSumAgreeingIntensities
,
PeakSpectrumCompareFunctor
,
OptimizePeakDeconvolution
,
SpectrumAlignmentScore
,
PenaltyFactors
,
ModelFitter
,
SimpleSeeder
,
FactoryProduct
,
PreciseTime
,
ProductModel
,
ConvexHull2D
,
SimpleExtender
,
FeaFiModule
,
IsotopeFitter1D
,
DateTime
,
DBoundingBox
,
LmaIsotopeModel
,
DIntervalBase
,
DRange
,
LmaGaussModel
,
HashMap::Iterator
,
HashMap::ConstIterator
,
LevMarqFitter1D
,
Matrix
,
LmaGaussFitter1D
,
FeatureFinderAlgorithm
,
SparseVector
,
StringList
,
GaussModel
,
InspectInfile
,
InternalCalibration
,
Tagging
,
SignalToNoiseEstimatorMeanIterative
,
FeatureFinderAlgorithmPicked
,
Fitter1D
,
BernNorm
,
ComplementMarker
,
SampleTreatment
,
IsotopeModel
,
FeatureFinderAlgorithmSimple
,
GoodDiffFilter
,
FeatureFinderAlgorithmSimplest
,
PickedPeak1D
,
ProteinIdentification
,
MarkerMower
,
NeutralLossDiffFilter
,
NeutralLossMarker
,
StopWatch
,
NLargest
,
Normalizer
,
Sample
,
ProteinHit
,
ParentFilter
,
BiGaussModel
,
Modification
,
ParentPeakMower
,
PeptideHit
,
ProcessingMethod
,
Instrument
,
PeakMarker
,
Scaler
,
PeptideIdentification
,
ROCCurve
,
Histogram
,
ThresholdMower
,
RawDataPoint2D
,
RangeManager
,
Peak2D
,
MSSpectrum
,
MSExperiment
,
FeatureMap
,
Feature
,
WindowMower
,
DPeakConstReferenceArray
,
DPeakArray
,
ConsensusPeak
,
ConsensusMap
,
SequestOutfile
,
InstrumentSettings
,
InspectOutfile
,
OMSSAXMLFile
,
PepNovoInfile
,
MetaInfoInterface
,
PersistentObject
,
IonDetector
,
ConsensusFeature
,
IonSource
,
Acquisition
,
PrecursorPeak
,
DSpectrum
,
HPLC
,
AcquisitionInfo
,
ExperimentalSettings
,
ContactPerson
,
RawDataPoint1D
,
LinearInterpolation
,
BasicStatistics
,
LinearRegression
,
Digestion
,
Gradient
,
BilinearInterpolation
,
MSExperiment
,
MassAnalyzer
,
MetaInfo
,
MetaInfoDescription
,
MetaInfoRegistry
,
Peak1D
,
Precursor
,
MSSpectrum
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
EmgFitter1D
,
SpectrumSettings
,
BiGaussFitter1D
,
ExtendedIsotopeFitter1D
,
EmgModel
,
DRawDataPoint
,
PeakDensityFilter
,
SequestInfile
,
GaussFitter1D
,
InterpolationModel
,
DPeak
,
LmaIsotopeFitter1D
,
BaseModel
,
PepNovoOutfile
,
TICFilter
,
Software
,
PenaltyFactorsIntensity
,
TwoDOptimization
,
PreprocessingFunctor
,
SourceFile
,
SqrtMower
operator==() :
ModelDescription
,
SourceFile
,
PeptideHit
,
MapMatcherRegression
,
PeptideIdentification
,
DRange
,
HPLC
,
BaseMapMatcher
,
DRange
,
HashMap::ConstIterator
,
FeatureMap
,
MetaInfoDescription
,
DPeakArray
,
Param::ParamNode
,
Param::ParamEntry
,
Matrix
,
HashMap::ConstIterator
,
DataFilters::DataFilter
,
ConvexHull2D
,
LinearMapping
,
InstrumentSettings
,
Residue
,
IsotopeDistribution
,
Residue
,
DBoundingBox
,
SequestInfile
,
Feature
,
HashMap::Iterator
,
Param
,
ElementPair
,
InspectInfile
,
AreaIterator
,
MetaInfo
,
Group
,
RawDataPoint2D
,
SampleTreatment
,
Element
,
IonSource
,
MetaInfoInterface
,
PeakShape
,
IonDetector
,
EmpiricalFormula
,
Sample
,
FactoryProduct
,
Tagging
,
ProteinHit
,
SpectrumSettings
,
DSpectrum
,
StopWatch
,
AcquisitionInfo
,
RangeManager
,
AASequence
,
SequestOutfile
,
PepNovoInfile
,
DPeakConstReferenceArray
,
MassAnalyzer
,
DIntervalBase
,
Param::ParamIterator
,
IndexTuple
,
TimeStamp
,
Precursor
,
InspectOutfile
,
ResidueDB
,
DefaultParamHandler
,
ProcessingMethod
,
DPosition
,
ContactPerson
,
Modification
,
Gradient
,
Software
,
ExperimentalSettings
,
ResidueModification
,
Instrument
,
DRawDataPoint
,
PickedPeak1D
,
DPeak
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
Peak1D
,
RawDataPoint1D
,
MSSpectrum
,
MSExperiment
,
Histogram
,
Digestion
,
Acquisition
,
EmpiricalFormula
,
HashMap
,
DBoundingBox
,
Peak2D
,
ProteinIdentification
,
PreciseTime
,
PepNovoOutfile
,
ProteinIdentification::SearchParameters
operator>() :
PreciseTime
,
StopWatch
,
DPeakConstReferenceArray
,
DPosition
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DSpectrum
,
DPeakArray
,
TimeStamp
operator>=() :
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
StopWatch
,
DPeakConstReferenceArray
,
DPosition
,
DSpectrum
,
DPeakArray
operator[]() :
ContinuousWaveletTransform
,
DPosition
,
AASequence
,
BinnedRep
,
DataFilters
,
SparseVector
,
DPeakConstReferenceArray
,
HashMap
,
ContinuousWaveletTransform
,
Histogram
,
DSpectrum
,
DPosition
,
HashMap
,
SparseVector
optimize() :
TwoDOptimization
,
OptimizePeakDeconvolution
,
OptimizePick
optimize_() :
LevMarqFitter1D
OptimizePeakDeconvolution() :
OptimizePeakDeconvolution
OptimizePick() :
OptimizePick
optimizeRegions_() :
TwoDOptimization
optimizeRegionsScanwise_() :
TwoDOptimization
optionalAttributeAsDouble_() :
XMLHandler
optionalAttributeAsInt_() :
XMLHandler
optionalAttributeAsString_() :
XMLHandler
optionalAttributeAsUInt_() :
XMLHandler
OutOfGrid() :
OutOfGrid
OutOfMemory() :
OutOfMemory
OutOfRange() :
OutOfRange
outputFileWritable_() :
TOPPBase
Generated Tue Apr 1 15:36:41 2008 -- using doxygen 1.5.4
OpenMS / TOPP 1.1