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SuffixArray Member List

This is the complete list of members for SuffixArray, including all inherited members.

findSpec(std::vector< std::vector< std::pair< std::pair< int, int >, float > > > &candidates, const std::vector< double > &spec)=0SuffixArray [pure virtual]
getNumberOfModifications()=0SuffixArray [pure virtual]
getTags()=0SuffixArray [pure virtual]
getTolerance() const =0SuffixArray [pure virtual]
getUseTags()=0SuffixArray [pure virtual]
isDigestingEnd(const char aa1, const char aa2) const =0SuffixArray [pure virtual]
open(const String &file_name)=0SuffixArray [pure virtual]
printStatistic()=0SuffixArray [pure virtual]
save(const String &file_name)=0SuffixArray [pure virtual]
setNumberOfModifications(unsigned int number_of_mods)=0SuffixArray [pure virtual]
setTags(const std::vector< String > &tags)=0SuffixArray [pure virtual]
setTolerance(double t)=0SuffixArray [pure virtual]
setUseTags(bool use_tags)=0SuffixArray [pure virtual]
SuffixArray(const String &st, const String &sa_file_name)SuffixArray
SuffixArray(const SuffixArray &sa)SuffixArray
SuffixArray()SuffixArray
toString()=0SuffixArray [pure virtual]
~SuffixArray()=0SuffixArray [pure virtual]


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