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MascotOutfile Class Reference
[File IO]

#include <OpenMS/FORMAT/MascotOutfile.h>

List of all members.


Detailed Description

Representation of a Mascot output file.

This class serves to read in a Mascot outfile. The information can be retrieved via the load function.

Public Member Functions

 MascotOutfile ()
 Constructor.
void load (String filename, ProteinIdentification &protein_identification, std::vector< PeptideIdentification > &peptide_identifications, Real p=0.05) throw (Exception::ParseError)
 loads data from a Mascot outfile


Constructor & Destructor Documentation

MascotOutfile (  ) 

Constructor.


Member Function Documentation

void load ( String  filename,
ProteinIdentification protein_identification,
std::vector< PeptideIdentification > &  peptide_identifications,
Real  p = 0.05 
) throw (Exception::ParseError)

loads data from a Mascot outfile

Parameters:
filename the file to be loaded
protein_identification the protein identification
peptide_identifications the peptide identifications
p the significance level (for the protein hit scores)
This class serves to read in a Mascot outfile. The information can be retrieved via the load function. This class is only contained to be compatible with previous versions. You should use the MascotXMLFile instead.


The documentation for this class was generated from the following file:
Generated Tue Apr 1 15:36:44 2008 -- using doxygen 1.5.4 OpenMS / TOPP 1.1