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ProteinIdentification::SearchParameters Struct Reference

#include <OpenMS/METADATA/ProteinIdentification.h>

Inheritance diagram for ProteinIdentification::SearchParameters:

MetaInfoInterface

List of all members.


Detailed Description

Search parameters of the DB search.

Public Member Functions

 SearchParameters ()
bool operator== (const SearchParameters &rhs) const
bool operator!= (const SearchParameters &rhs) const

Public Attributes

String db
 The used database.
String db_version
 The database version.
String taxonomy
 The taxonomy restriction.
String charges
 The allowed charges for the search.
PeakMassType mass_type
 Mass type of the peaks.
std::vector< Stringfixed_modifications
 Used fixed modifications.
std::vector< Stringvariable_modifications
 Allowed variable modifications.
DigestionEnzyme enzyme
 The enzyme used for cleavage.
UInt missed_cleavages
 The number of allowed missed cleavages.
DoubleReal peak_mass_tolerance
 Mass tolerance of fragment ions (Dalton).
DoubleReal precursor_tolerance
 Mass tolerance of precursor ions (Dalton).

Constructor & Destructor Documentation

SearchParameters (  )  [inline]


Member Function Documentation

bool operator== ( const SearchParameters rhs  )  const [inline]

bool operator!= ( const SearchParameters rhs  )  const [inline]


Member Data Documentation

String db

The used database.

String db_version

The database version.

String taxonomy

The taxonomy restriction.

String charges

The allowed charges for the search.

PeakMassType mass_type

Mass type of the peaks.

std::vector<String> fixed_modifications

Used fixed modifications.

std::vector<String> variable_modifications

Allowed variable modifications.

DigestionEnzyme enzyme

The enzyme used for cleavage.

UInt missed_cleavages

The number of allowed missed cleavages.

DoubleReal peak_mass_tolerance

Mass tolerance of fragment ions (Dalton).

DoubleReal precursor_tolerance

Mass tolerance of precursor ions (Dalton).


The documentation for this struct was generated from the following file:
Generated Tue Apr 1 15:36:47 2008 -- using doxygen 1.5.4 OpenMS / TOPP 1.1