assignRanks() | PeptideIdentification | |
clearMetaInfo() | MetaInfoInterface | |
createIfNotExists_() | MetaInfoInterface | [inline, protected] |
empty() const | PeptideIdentification | |
getHits() const | PeptideIdentification | |
getIdentifier() const | PeptideIdentification | |
getKeys(std::vector< String > &keys) const | MetaInfoInterface | |
getKeys(std::vector< UInt > &keys) const | MetaInfoInterface | |
getMetaValue(const String &name) const | MetaInfoInterface | |
getMetaValue(UInt index) const | MetaInfoInterface | |
getNonReferencingHits(const String &protein_accession, std::vector< PeptideHit > &peptide_hits) const | PeptideIdentification | |
getNonReferencingHits(const std::vector< String > &accessions, std::vector< PeptideHit > &peptide_hits) const | PeptideIdentification | |
getNonReferencingHits(const std::vector< ProteinHit > &protein_hits, std::vector< PeptideHit > &peptide_hits) const | PeptideIdentification | |
getReferencingHits(const String &protein_accession, std::vector< PeptideHit > &peptide_hits) const | PeptideIdentification | |
getReferencingHits(const std::vector< String > &accessions, std::vector< PeptideHit > &peptide_hits) const | PeptideIdentification | |
getReferencingHits(const std::vector< ProteinHit > &protein_hits, std::vector< PeptideHit > &peptide_hits) const | PeptideIdentification | |
getScoreType() const | PeptideIdentification | |
getSignificanceThreshold() const | PeptideIdentification | |
higher_score_better_ | PeptideIdentification | [protected] |
hits_ | PeptideIdentification | [protected] |
HitType typedef | PeptideIdentification | |
id_ | PeptideIdentification | [protected] |
insertHit(const PeptideHit &hit) | PeptideIdentification | |
isHigherScoreBetter() const | PeptideIdentification | |
isMetaEmpty() const | MetaInfoInterface | |
meta_ | MetaInfoInterface | [protected] |
MetaInfoInterface() | MetaInfoInterface | |
MetaInfoInterface(const MetaInfoInterface &rhs) | MetaInfoInterface | |
metaRegistry() const | MetaInfoInterface | |
metaValueExists(const String &name) const | MetaInfoInterface | |
metaValueExists(UInt index) const | MetaInfoInterface | |
operator!=(const PeptideIdentification &rhs) const | PeptideIdentification | |
OpenMS::MetaInfoInterface::operator!=(const MetaInfoInterface &rhs) const | MetaInfoInterface | |
operator=(const PeptideIdentification &source) | PeptideIdentification | |
OpenMS::MetaInfoInterface::operator=(const MetaInfoInterface &rhs) | MetaInfoInterface | |
operator==(const PeptideIdentification &rhs) const | PeptideIdentification | |
OpenMS::MetaInfoInterface::operator==(const MetaInfoInterface &rhs) const | MetaInfoInterface | |
PeptideIdentification() | PeptideIdentification | |
PeptideIdentification(const PeptideIdentification &source) | PeptideIdentification | |
removeMetaValue(const String &name) | MetaInfoInterface | |
removeMetaValue(UInt index) | MetaInfoInterface | |
score_type_ | PeptideIdentification | [protected] |
setHigherScoreBetter(bool value) | PeptideIdentification | |
setHits(const std::vector< PeptideHit > &hits) | PeptideIdentification | |
setIdentifier(const String &id) | PeptideIdentification | |
setMetaValue(const String &name, const String &value) | MetaInfoInterface | |
setMetaValue(UInt index, const String &value) | MetaInfoInterface | |
setMetaValue(const String &name, Int value) | MetaInfoInterface | |
setMetaValue(UInt index, Int value) | MetaInfoInterface | |
setMetaValue(const String &name, UInt value) | MetaInfoInterface | |
setMetaValue(UInt index, UInt value) | MetaInfoInterface | |
setMetaValue(const String &name, Real value) | MetaInfoInterface | |
setMetaValue(UInt index, Real value) | MetaInfoInterface | |
setMetaValue(const String &name, DoubleReal value) | MetaInfoInterface | |
setMetaValue(UInt index, DoubleReal value) | MetaInfoInterface | |
setMetaValue(const String &name, const DataValue &value) | MetaInfoInterface | |
setMetaValue(UInt index, const DataValue &value) | MetaInfoInterface | |
setScoreType(const String &type) | PeptideIdentification | |
setSignificanceThreshold(Real value) | PeptideIdentification | |
significance_threshold_ | PeptideIdentification | [protected] |
sort() | PeptideIdentification | |
~MetaInfoInterface() | MetaInfoInterface | |
~PeptideIdentification() | PeptideIdentification | [virtual] |