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Here is a list of all class members with links to the classes they belong to:
- o -
O :
ExtendedIsotopeModel
,
IsotopeModel
,
LmaIsotopeModel
,
LmaIsotopeFitter1D
OFF :
MassAnalyzer
offset_ :
LinearInterpolation
offset_0_ :
BilinearInterpolation
offset_1_ :
BilinearInterpolation
ok() :
DBSpectrumSelectorDialog
ok_() :
ToolsDialog
ok_button_ :
ToolsDialog
OMSSAXMLFile() :
OMSSAXMLFile
OMSSAXMLHandler() :
OMSSAXMLHandler
ON :
MassAnalyzer
one_letter_code_ :
Residue
op :
DataFilters::DataFilter
op_changed_() :
DataFilterDialog
open() :
SuffixArray
,
SuffixArraySeqan
,
SuffixArrayTrypticCompressed
open_boxes_ :
IsotopeWaveletTransform
open_tag_ :
PTMXMLHandler
open_tags_ :
XMLHandler
openAsLayer() :
ToolsDialog
openAsWindow() :
ToolsDialog
OpenDialog() :
OpenDialog
opened :
Param::ParamIterator::TraceInfo
openFile() :
INIFileEditorWindow
openglcanvas_ :
Spectrum3DCanvas
openglwidget() :
Spectrum3DCanvas
OpenMS_getFileBlocksize() :
MemoryMap
OpenMS_mmap() :
MemoryMap
OpenMS_unmap() :
MemoryMap
openPreferences() :
SpectrumWidget
openRecentFile() :
TOPPViewBase
openSpectrumDialog() :
TOPPViewBase
OPENSPLIT :
IonSource
operator *() :
EdwardsLippertIterator
,
IsotopeDistribution
,
PepIterator
,
TrypticIterator
,
DPosition
,
HashMap::Iterator
,
HashMap::ConstIterator
,
Param::ParamIterator
,
SparseVector::SparseVectorIterator
,
SparseVector::SparseVectorConstIterator
,
FastaIterator
,
FastaIteratorIntern
,
AreaIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
,
IntensityIterator
,
MzIterator
,
RtIterator
operator *=() :
IsotopeDistribution
,
DPosition
operator double() :
SparseVector::DoubleProxy
operator DoubleReal() :
DataValue
operator Int() :
DataValue
operator Real() :
DataValue
operator std::string() :
DataValue
operator UInt() :
DataValue
operator!=() :
Software
,
SourceFile
,
SpectrumSettings
,
StopWatch
,
ElementPair
,
ModelDescription
,
Group
,
IndexTuple
,
LinearMapping
,
AASequence
,
Element
,
EmpiricalFormula
,
IsotopeDistribution
,
Residue
,
ResidueDB
,
ResidueModification
,
DataValue
,
DIntervalBase
,
DPosition
,
HashMap::Iterator
,
HashMap::ConstIterator
,
HashMap
,
Param::ParamIterator
,
SparseVector::SparseVectorIterator
,
SparseVector::SparseVectorConstIterator
,
DataFilters::DataFilter
,
AreaIterator
,
DPeak
,
DPeakArray
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray
,
DRawDataPoint
,
DSpectrum
,
FeatureMap
,
MSExperiment
,
MSSpectrum
,
Peak1D
,
Peak2D
,
PickedPeak1D
,
RangeManager
,
RawDataPoint1D
,
RawDataPoint2D
,
Histogram
,
Acquisition
,
AcquisitionInfo
,
ContactPerson
,
ExperimentalSettings
,
Gradient
,
HPLC
,
Instrument
,
InstrumentSettings
,
IonDetector
,
IonSource
,
MassAnalyzer
,
MetaInfo
,
MetaInfoInterface
,
PeptideHit
,
PeptideIdentification
,
Precursor
,
ProcessingMethod
,
ProteinHit
,
ProteinIdentification::SearchParameters
,
ProteinIdentification
operator()() :
DelaunayPairFinder::GeometricTraits::Construct_center_2
,
IndexTuple::IndexLess
,
PairMatcher::Comparator
,
BinnedRepCompareFunctor
,
BinnedRepMutualInformation
,
BinnedRepSharedPeakCount
,
BinnedRepSpectrumContrastAngle
,
BinnedRepSumAgreeingIntensities
,
PeakSpectrumCompareFunctor
,
SpectrumAlignmentScore
,
SpectrumCheapDPCorr
,
SpectrumPrecursorComparator
,
ZhangSimilarityScore
,
HashFunction
,
Matrix
,
PointerComparator
,
ReverseComparator
,
LexicographicComparator
,
DRawDataPoint::IntensityLess
,
DRawDataPoint::NthPositionLess
,
DRawDataPoint::PositionLess
,
Feature::OverallQualityLess
,
MSSpectrum::RTLess
,
PickedPeak1D
,
PickedPeak1D::WidthLess
,
InRTRange
,
InMSLevelRange
,
HasScanMode
,
IsEmptySpectrum
,
InMzRange
,
InIntensityRange
,
RawDataPoint1D::IntensityLess
,
RawDataPoint1D::PositionLess
,
RawDataPoint2D::IntensityLess
,
RawDataPoint2D::NthPositionLess
,
RawDataPoint2D::PositionLess
,
ROCCurve::simsortdec
,
PeptideHit::ScoreMore
,
PeptideHit::ScoreLess
,
IntensityLess
,
SimpleExtender::IndexWithPriority::PriorityLess
,
PeakShape
,
PeakShape::PositionLess
,
TwoDOptimization::IndexLess
operator+() :
AASequence
,
EmpiricalFormula
,
IsotopeDistribution
,
DPosition
,
String
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
operator++() :
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
,
EdwardsLippertIterator
,
PepIterator
,
TrypticIterator
,
HashMap::Iterator
,
HashMap::ConstIterator
,
Param::ParamIterator
,
SparseVector::SparseVectorIterator
,
SparseVector::SparseVectorConstIterator
,
FastaIterator
,
FastaIteratorIntern
,
AreaIterator
operator+=() :
AASequence
,
EmpiricalFormula
,
IsotopeDistribution
,
DPosition
,
String
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
operator-() :
EmpiricalFormula
,
DPosition
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
operator--() :
HashMap::ConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
operator-=() :
EmpiricalFormula
,
DPosition
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
operator->() :
HashMap::Iterator
,
HashMap::ConstIterator
,
Param::ParamIterator
,
AreaIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray::DPeakConstReferenceArrayIterator
operator/=() :
DPosition
operator<() :
PreciseTime
,
TimeStamp
,
DPosition
,
Matrix
,
DPeakArray
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray
,
DSpectrum
,
StopWatch
,
FeatureFinderAlgorithmPicked::Seed
operator<< :
AASequence
,
Element
,
EmpiricalFormula
,
Residue
,
BinnedRep
,
DataValue
,
StringList
,
BasicStatistics
,
DBoundingBox
,
Matrix
operator<=() :
DPosition
,
DPeakArray
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray
,
DSpectrum
,
StopWatch
operator=() :
FactoryProduct
,
SpectrumPrecursorComparator
,
Scaler
,
Gradient
,
IsotopeFitter1D
,
PeakSpectrumCompareFunctor
,
IsotopeModel
,
LevMarqFitter1D
,
LmaGaussModel
,
BinnedRepMutualInformation
,
LmaIsotopeFitter1D
,
LmaIsotopeModel
,
ModelDescription
,
TheoreticalSpectrumGenerator
,
ProductModel
,
SimpleSeeder
,
DSpectrum
,
PeakShape
,
TwoDOptimization
,
DSpectrum
,
DPeakConstReferenceArray
,
Element
,
ConsensusMap
,
ConsensusPeak
,
ConsensusFeature
,
PairMatcher
,
SequestOutfile
,
OMSSAXMLFile
,
PepNovoInfile
,
GridCell
,
WindowMower
,
HashMap::ConstIterator
,
PeakMarker
,
ParentPeakMower
,
NeutralLossDiffFilter
,
NeutralLossMarker
,
IsotopeDiffFilter
,
ComplementFilter
,
ComplementMarker
,
BernNorm
,
SignalToNoiseEstimatorMeanIterative
,
StringList
,
SparseVector::DoubleProxy
,
FuzzyStringComparator
,
PreciseTime
,
DBoundingBox
,
DataValue
,
FeatureDecharger
,
ConsensusID
,
PILISScoring
,
ProtonDistributionModel
,
DelaunayPairFinder::Point
,
ElementPair
,
Grid
,
Group
,
IndexTuple
,
LinearMapping
,
PoseClusteringShiftSuperimposer::Shift
,
TOPPBase::ParameterInformation
,
AASequence
,
MaxLikeliFitter1D
,
ElementDB
,
EmpiricalFormula
,
IsotopeDistribution
,
Residue
,
ResidueDB
,
ResidueModification
,
BinnedRep
,
HierarchicalClustering
,
BinnedRepCompareFunctor
,
BinnedRepSharedPeakCount
,
BinnedRepSpectrumContrastAngle
,
BinnedRepSumAgreeingIntensities
,
PenaltyFactorsIntensity
,
SpectrumAlignment
,
SpectrumAlignmentScore
,
SpectrumCheapDPCorr
,
OptimizePeakDeconvolution
,
ZhangSimilarityScore
,
PenaltyFactors
,
ModelFitter
,
TimeStamp
,
ConvexHull2D
,
Date
,
DateTime
,
SimpleExtender
,
FeaFiModule
,
DefaultParamHandler
,
DIntervalBase
,
DPosition
,
DRange
,
HashMap::Iterator
,
HashMap::ConstIterator
,
HashMap
,
Matrix
,
Param
,
SparseVector::DoubleProxy
,
SparseVector
,
LmaGaussFitter1D
,
GaussFitter1D
,
StringList
,
InternalCalibration
,
SignalToNoiseEstimator
,
GaussModel
,
SignalToNoiseEstimatorMedian
,
InterpolationModel
,
FeatureFinderAlgorithmPicked
,
FilterFunctor
,
GoodDiffFilter
,
IntensityBalanceFilter
,
IsotopeMarker
,
MarkerMower
,
Peak2D
,
FeatureFinderAlgorithmSimplest
,
ProteinHit
,
ExtendedIsotopeFitter1D
,
RawDataPoint2D
,
NLargest
,
Normalizer
,
ParentFilter
,
Histogram
,
SourceFile
,
ExtendedIsotopeModel
,
PeakDensityFilter
,
ProcessingMethod
,
PreprocessingFunctor
,
SqrtMower
,
ThresholdMower
,
IonDetector
,
IonSource
,
InstrumentSettings
,
Instrument
,
MetaInfoDescription
,
ContactPerson
,
Acquisition
,
TICFilter
,
PeptideHit
,
LinearInterpolation
,
RawDataPoint1D
,
InspectInfile
,
Peak1D
,
MSSpectrum
,
InspectOutfile
,
EmgFitter1D
,
Software
,
PrecursorPeak
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakArray
,
StopWatch
,
SpectrumSettings
,
PepNovoOutfile
,
PersistentObject
,
SequestInfile
,
Tagging
,
AreaIterator
,
Sample
,
DPeak
,
DRawDataPoint
,
AcquisitionInfo
,
Precursor
,
Feature
,
FeatureMap
,
MSExperiment
,
MSSpectrum
,
PickedPeak1D
,
RangeManager
,
BilinearInterpolation
,
MassAnalyzer
,
LinearRegression
,
ROCCurve
,
MetaInfo
,
Digestion
,
HPLC
,
ExperimentalSettings
,
MSExperiment
,
MetaInfoInterface
,
MetaInfoRegistry
,
Modification
,
PeptideIdentification
,
ProteinIdentification
,
SampleTreatment
,
BasicStatistics
,
BaseModel
,
BiGaussFitter1D
,
BiGaussModel
,
EmgModel
,
FeatureFinderAlgorithm
,
FeatureFinderAlgorithmSimple
,
Fitter1D
operator==() :
IonSource
,
ProteinIdentification
,
Software
,
ElementPair
,
DataFilters::DataFilter
,
RawDataPoint1D
,
Peak1D
,
BaseMapMatcher
,
Group
,
LinearMapping
,
AASequence
,
EmpiricalFormula
,
Tagging
,
SequestOutfile
,
ResidueDB
,
SourceFile
,
FactoryProduct
,
TimeStamp
,
Sample
,
DPosition
,
HPLC
,
DPeak
,
DRange
,
ModelDescription
,
MetaInfoInterface
,
ProteinHit
,
StopWatch
,
MetaInfo
,
InstrumentSettings
,
Feature
,
Acquisition
,
RangeManager
,
Param
,
DBoundingBox
,
EmpiricalFormula
,
InspectOutfile
,
Param::ParamNode
,
FeatureMap
,
InspectInfile
,
PepNovoOutfile
,
ContactPerson
,
Param::ParamIterator
,
DPeakArray
,
DPeakConstReferenceArray
,
MSSpectrum
,
Residue
,
HashMap
,
Residue
,
DRange
,
PeptideHit
,
Precursor
,
SpectrumSettings
,
ProteinIdentification::SearchParameters
,
DefaultParamHandler
,
DIntervalBase
,
ConvexHull2D
,
PeakShape
,
MapMatcherRegression
,
AcquisitionInfo
,
PeptideIdentification
,
ResidueModification
,
PreciseTime
,
IsotopeDistribution
,
AASequence
,
PepNovoInfile
,
IndexTuple
,
SampleTreatment
,
HashMap::ConstIterator
,
Matrix
,
Histogram
,
Param::ParamEntry
,
RawDataPoint2D
,
ExperimentalSettings
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
ProcessingMethod
,
IonDetector
,
DSpectrum
,
Element
,
HashMap::Iterator
,
Modification
,
HashMap::ConstIterator
,
SequestInfile
,
AreaIterator
,
DBoundingBox
,
MassAnalyzer
,
Gradient
,
PickedPeak1D
,
Peak2D
,
Instrument
,
DRawDataPoint
,
MSExperiment
,
Digestion
,
DataValue
,
MetaInfoDescription
operator>() :
DPosition
,
DPeakArray
,
DSpectrum
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray
,
PreciseTime
,
TimeStamp
,
StopWatch
operator>=() :
StopWatch
,
DPeakConstReferenceArray::DPeakConstReferenceArrayConstIterator
,
DPeakConstReferenceArray
,
DPeakArray
,
DSpectrum
,
DPosition
operator>> :
AASequence
operator[]() :
AASequence
,
HashMap
,
BinnedRep
,
ContinuousWaveletTransform
,
AASequence
,
DataFilters
,
ContinuousWaveletTransform
,
SparseVector
,
DSpectrum
,
DPosition
,
SparseVector
,
Histogram
,
DSpectrum
,
DPeakConstReferenceArray
optimization_ :
PeakPickerCWT
optimize() :
OptimizePick
,
OptimizePeakDeconvolution
,
TwoDOptimization
optimize_() :
LevMarqFitter1D
OptimizePeakDeconvolution() :
OptimizePeakDeconvolution
OptimizePick() :
OptimizePick
optimizeRegions_() :
TwoDOptimization
optimizeRegionsScanwise_() :
TwoDOptimization
optional_begin :
FeatureFinderAlgorithmPicked::TheoreticalIsotopePattern
optional_end :
FeatureFinderAlgorithmPicked::TheoreticalIsotopePattern
optional_fit_improvement_ :
FeatureFinderAlgorithmPicked
optionalAttributeAsDouble_() :
XMLHandler
optionalAttributeAsInt_() :
XMLHandler
optionalAttributeAsString_() :
XMLHandler
optionalAttributeAsUInt_() :
XMLHandler
options_ :
DBAdapter
,
FeatureXMLHandler
,
MzXMLHandler
,
FeatureXMLFile
,
MzXMLFile
,
FileHandler
,
MzDataFile
,
MzDataHandler
,
DTA2DFile
order_ :
SavitzkyGolayFilter
organism_ :
Sample
other :
ExternalAllocator::rebind
OutOfGrid() :
OutOfGrid
OutOfMemory() :
OutOfMemory
OutOfRange() :
OutOfRange
output_combo_ :
ToolsDialog
OUTPUT_FILE :
TOPPBase::ParameterInformation
output_lines_ :
SequestInfile
output_radio_ :
ToolsDialog
output_string_ :
ToolsDialog
outputFileWritable_() :
TOPPBase
outside_ :
LinearInterpolation
outside_0_ :
BilinearInterpolation
outside_1_ :
BilinearInterpolation
overall_data_range_ :
SpectrumCanvas
overall_quality_ :
Feature
overall_score :
FeatureFinderAlgorithmPicked::PeakInfo
overall_values_ :
Spectrum3DOpenGLCanvas
Generated Tue Apr 1 15:36:41 2008 -- using doxygen 1.5.4
OpenMS / TOPP 1.1