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IsotopeWaveletTransform Member List

This is the complete list of members for IsotopeWaveletTransform, including all inherited members.

acc_IsotopeWaveletTransform [protected]
av_MZ_spacing_IsotopeWaveletTransform [protected]
Box_ typedefIsotopeWaveletTransform
c_mzs_IsotopeWaveletTransform [protected]
c_spacings_IsotopeWaveletTransform [protected]
checkPosition_(const MSSpectrum< PeakType > &candidate, const MSSpectrum< PeakType > &ref, const DoubleReal seed_mz, const UInt c, const UInt scan_index)IsotopeWaveletTransform [inline, protected, virtual]
chordTrapezoidRule_(const DoubleReal a, const DoubleReal b, const DoubleReal fa, const DoubleReal fb)IsotopeWaveletTransform [inline, protected]
chordTrapezoidRule_(const std::vector< DoubleReal > &x, const std::vector< DoubleReal > &y)IsotopeWaveletTransform [inline, protected]
closed_boxes_IsotopeWaveletTransform [protected]
clusterSeeds_(const std::vector< MSSpectrum< PeakType > > &candidates, const MSSpectrum< PeakType > &ref, const UInt scan_index, const UInt max_charge)IsotopeWaveletTransform [inline, protected]
estimatePeakCutOffs_(const DoubleReal min_mz, const DoubleReal max_mz, const UInt max_charge)IsotopeWaveletTransform [inline, protected]
getAvIntens_(const MSSpectrum< PeakType > &scan)IsotopeWaveletTransform [inline, protected]
getAvMZSpacing_(const MSSpectrum< PeakType > &scan, Int start_index=0, Int end_index=-1)IsotopeWaveletTransform [inline, protected]
getClosedBoxes()IsotopeWaveletTransform [inline, virtual]
getCubicInterpolatedValue_(const std::vector< DoubleReal > &x, const DoubleReal xi, const std::vector< DoubleReal > &y)IsotopeWaveletTransform [inline, protected]
getNearBys_(const MSSpectrum< PeakType > &signal, const DoubleReal mz, const UInt start=0) const IsotopeWaveletTransform [inline, protected]
getPeakCutOff_(const DoubleReal mass, const UInt z)IsotopeWaveletTransform [inline, protected]
getSdIntens_(const MSSpectrum< PeakType > &scan, const DoubleReal mean)IsotopeWaveletTransform [inline, protected]
getTransforms(const MSSpectrum< PeakType > &scan, std::vector< MSSpectrum< PeakType > > &transforms, const UInt max_charge, const Int mode)IsotopeWaveletTransform [inline, virtual]
identifyCharges(const std::vector< MSSpectrum< PeakType > > &candidates, const MSSpectrum< PeakType > &ref, const UInt scan_index, const DoubleReal ampl_cutoff=0)IsotopeWaveletTransform [inline, virtual]
IsotopeWaveletTransform(const DoubleReal min_mz, const DoubleReal max_mz, const UInt max_charge)IsotopeWaveletTransform [inline]
IsotopeWaveletTransform()IsotopeWaveletTransform [inline, protected]
mapSeeds2Features(const MSExperiment< PeakType > &map, const UInt max_charge, const UInt RT_votes_cutoff)IsotopeWaveletTransform [inline]
open_boxes_IsotopeWaveletTransform [protected]
peak_cutoff_intercept_IsotopeWaveletTransform [protected]
peak_cutoff_slope_IsotopeWaveletTransform [protected]
prod_IsotopeWaveletTransform [protected]
psi_IsotopeWaveletTransform [protected]
push2Box_(const DoubleReal mz, const UInt scan, UInt charge, const DoubleReal score, const DoubleReal intens, const DoubleReal rt, const UInt MZ_begin, const UInt MZ_end)IsotopeWaveletTransform [inline, protected, virtual]
push2TmpBox_(const DoubleReal mz, const UInt scan, UInt charge, const DoubleReal score, const DoubleReal intens, const DoubleReal rt, const UInt MZ_begin, const UInt MZ_end)IsotopeWaveletTransform [inline, protected, virtual]
sampleTheWavelet_(const MSSpectrum< PeakType > &scan, const UInt wavelet_length, const UInt mz_index, const DoubleReal offset, const UInt charge, const UInt peak_cutoff, const Int mode=+1)IsotopeWaveletTransform [inline, protected]
scoreThis_(const MSSpectrum< PeakType > &candidate, const UInt peak_cutoff, const DoubleReal seed_mz, const UInt c, const DoubleReal intens, const DoubleReal ampl_cutoff=0)IsotopeWaveletTransform [inline, protected, virtual]
spline_IsotopeWaveletTransform [protected]
tmp_boxes_IsotopeWaveletTransform [protected]
updateBoxStates(const UInt scan_index, const UInt RT_interleave, const UInt RT_votes_cutoff)IsotopeWaveletTransform [inline]
xs_IsotopeWaveletTransform [protected]
~IsotopeWaveletTransform()IsotopeWaveletTransform [inline, virtual]


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