addProteinIdentification(ProteinIdentification &protein_identification) | ExperimentalSettings | |
alloc_ | MSExperiment | [protected] |
areaBegin(CoordinateType min_rt, CoordinateType max_rt, CoordinateType min_mz, CoordinateType max_mz) | MSExperiment | [inline] |
areaBeginConst(CoordinateType min_rt, CoordinateType max_rt, CoordinateType min_mz, CoordinateType max_mz) const | MSExperiment | [inline] |
areaEnd() | MSExperiment | [inline] |
areaEndConst() const | MSExperiment | [inline] |
AreaIterator typedef | MSExperiment | |
AreaType typedef | MSExperiment | |
Base typedef | MSExperiment | |
Base_ typedef | MSExperiment | [protected] |
clearChildIds_() | MSExperiment | [inline, protected, virtual] |
clearId(bool deep=true) | PersistentObject | |
clearMetaInfo() | MetaInfoInterface | |
clearRanges() | RangeManager< 2 > | [inline] |
comment_ | ExperimentalSettings | [protected] |
ConstAreaIterator typedef | MSExperiment | |
ConstIterator typedef | MSExperiment | |
ConstPeakReference typedef | MSExperiment | |
contacts_ | ExperimentalSettings | [protected] |
CoordinateType typedef | MSExperiment | |
createIfNotExists_() | MetaInfoInterface | [inline, protected] |
date_ | ExperimentalSettings | [protected] |
DIMENSION enum value | RangeManager< 2 > | |
ExperimentalSettings() | ExperimentalSettings | |
ExperimentalSettings(const ExperimentalSettings &source) | ExperimentalSettings | |
ExperimentType enum name | ExperimentalSettings | |
get2DData(Container &cont) const | MSExperiment | [inline] |
getComment() const | ExperimentalSettings | |
getContacts() const | ExperimentalSettings | |
getContacts() | ExperimentalSettings | |
getDataRange() const | MSExperiment | [inline] |
getDate() const | ExperimentalSettings | |
getExperimentalSettings() const | MSExperiment | [inline] |
getExperimentalSettings() | MSExperiment | [inline] |
getHPLC() const | ExperimentalSettings | |
getHPLC() | ExperimentalSettings | |
getInstrument() const | ExperimentalSettings | |
getInstrument() | ExperimentalSettings | |
getKeys(std::vector< String > &keys) const | MetaInfoInterface | |
getKeys(std::vector< UInt > &keys) const | MetaInfoInterface | |
getMax() const | RangeManager< 2 > | [inline] |
getMaxInt() const | RangeManager< 2 > | [inline] |
getMaxMZ() const | MSExperiment | [inline] |
getMaxRT() const | MSExperiment | [inline] |
getMetaValue(const String &name) const | MetaInfoInterface | |
getMetaValue(UInt index) const | MetaInfoInterface | |
getMin() const | RangeManager< 2 > | [inline] |
getMinInt() const | RangeManager< 2 > | [inline] |
getMinMZ() const | MSExperiment | [inline] |
getMinRT() const | MSExperiment | [inline] |
getMSLevels() const | MSExperiment | [inline] |
getPersistenceId() const | PersistentObject | |
getPrecursorSpectrum(ConstIterator iterator) const | MSExperiment | [inline] |
getProcessingMethod() const | ExperimentalSettings | |
getProcessingMethod() | ExperimentalSettings | |
getProteinIdentifications() const | ExperimentalSettings | |
getProteinIdentifications() | ExperimentalSettings | |
getSample() const | ExperimentalSettings | |
getSample() | ExperimentalSettings | |
getSize() const | MSExperiment | [inline] |
getSoftware() const | ExperimentalSettings | |
getSoftware() | ExperimentalSettings | |
getSourceFile() const | ExperimentalSettings | |
getSourceFile() | ExperimentalSettings | |
getType() const | ExperimentalSettings | |
hplc_ | ExperimentalSettings | [protected] |
HPLC_MS enum value | ExperimentalSettings | |
HPLC_MS_MS enum value | ExperimentalSettings | |
instrument_ | ExperimentalSettings | [protected] |
int_range_ | RangeManager< 2 > | [protected] |
IntensityRangeType typedef | RangeManager< 2 > | |
IntensityType typedef | MSExperiment | |
isMetaEmpty() const | MetaInfoInterface | |
Iterator typedef | MSExperiment | |
meta_ | MetaInfoInterface | [protected] |
MetaInfoInterface() | MetaInfoInterface | |
MetaInfoInterface(const MetaInfoInterface &rhs) | MetaInfoInterface | |
metaRegistry() const | MetaInfoInterface | |
metaValueExists(const String &name) const | MetaInfoInterface | |
metaValueExists(UInt index) const | MetaInfoInterface | |
MS enum value | ExperimentalSettings | |
ms_levels_ | MSExperiment | [protected] |
MS_MS enum value | ExperimentalSettings | |
MSExperiment() | MSExperiment | [inline] |
MSExperiment(const AllocT &alloc) | MSExperiment | [inline] |
MSExperiment(const MSExperiment &source) | MSExperiment | [inline] |
NamesOfExperimentType | ExperimentalSettings | [static] |
operator!=(const MSExperiment &rhs) const | MSExperiment | [inline] |
OpenMS::RangeManager< 2 >::operator!=(const RangeManager &rhs) const | RangeManager< 2 > | [inline] |
OpenMS::ExperimentalSettings::operator!=(const ExperimentalSettings &rhs) const | ExperimentalSettings | |
OpenMS::MetaInfoInterface::operator!=(const MetaInfoInterface &rhs) const | MetaInfoInterface | |
operator=(const MSExperiment &source) | MSExperiment | [inline] |
operator=(const ExperimentalSettings &source) | MSExperiment | [inline] |
OpenMS::RangeManager< 2 >::operator=(const RangeManager &rhs) | RangeManager< 2 > | [inline] |
OpenMS::MetaInfoInterface::operator=(const MetaInfoInterface &rhs) | MetaInfoInterface | |
OpenMS::PersistentObject::operator=(const PersistentObject &rhs) | PersistentObject | |
operator==(const MSExperiment &rhs) const | MSExperiment | [inline] |
OpenMS::RangeManager< 2 >::operator==(const RangeManager &rhs) const | RangeManager< 2 > | [inline] |
OpenMS::ExperimentalSettings::operator==(const ExperimentalSettings &rhs) const | ExperimentalSettings | |
OpenMS::MetaInfoInterface::operator==(const MetaInfoInterface &rhs) const | MetaInfoInterface | |
PeakReference typedef | MSExperiment | |
PeakType typedef | MSExperiment | |
persistence_id_ | PersistentObject | [protected] |
PersistentObject() | PersistentObject | |
pos_range_ | RangeManager< 2 > | [protected] |
PositionRangeType typedef | RangeManager< 2 > | |
PositionType typedef | RangeManager< 2 > | |
processing_method_ | ExperimentalSettings | [protected] |
protein_identifications_ | ExperimentalSettings | [protected] |
push_back(const SpectrumType &spec) | MSExperiment | [inline] |
push_back(const MSSpectrum< PeakT, A > &spec) | MSExperiment | [inline] |
RangeManager() | RangeManager< 2 > | [inline] |
RangeManager(const RangeManager &rhs) | RangeManager< 2 > | [inline] |
RangeManagerType typedef | MSExperiment | |
removeMetaValue(const String &name) | MetaInfoInterface | |
removeMetaValue(UInt index) | MetaInfoInterface | |
reset() | MSExperiment | [inline] |
resize(const typename Base::size_type &size) | MSExperiment | [inline] |
RTBegin(CoordinateType rt) const | MSExperiment | [inline] |
RTBegin(CoordinateType rt) | MSExperiment | [inline] |
RTEnd(CoordinateType rt) const | MSExperiment | [inline] |
RTEnd(CoordinateType rt) | MSExperiment | [inline] |
sample_ | ExperimentalSettings | [protected] |
set2DData(const Container &cont) | MSExperiment | [inline] |
setComment(const String &comment) | ExperimentalSettings | |
setContacts(const std::vector< ContactPerson > &contacts) | ExperimentalSettings | |
setDate(const Date &date) | ExperimentalSettings | |
setHPLC(const HPLC &hplc) | ExperimentalSettings | |
setInstrument(const Instrument &instrument) | ExperimentalSettings | |
setMetaValue(const String &name, const String &value) | MetaInfoInterface | |
setMetaValue(UInt index, const String &value) | MetaInfoInterface | |
setMetaValue(const String &name, Int value) | MetaInfoInterface | |
setMetaValue(UInt index, Int value) | MetaInfoInterface | |
setMetaValue(const String &name, UInt value) | MetaInfoInterface | |
setMetaValue(UInt index, UInt value) | MetaInfoInterface | |
setMetaValue(const String &name, Real value) | MetaInfoInterface | |
setMetaValue(UInt index, Real value) | MetaInfoInterface | |
setMetaValue(const String &name, DoubleReal value) | MetaInfoInterface | |
setMetaValue(UInt index, DoubleReal value) | MetaInfoInterface | |
setMetaValue(const String &name, const DataValue &value) | MetaInfoInterface | |
setMetaValue(UInt index, const DataValue &value) | MetaInfoInterface | |
setPersistenceId(const UID &persistence_id) | PersistentObject | |
setProcessingMethod(const ProcessingMethod &processing_method) | ExperimentalSettings | |
setProteinIdentifications(const std::vector< ProteinIdentification > &protein_identifications) | ExperimentalSettings | |
setSample(const Sample &sample) | ExperimentalSettings | |
setSoftware(const Software &software) | ExperimentalSettings | |
setSourceFile(const SourceFile &source_file) | ExperimentalSettings | |
setType(ExperimentType type) | ExperimentalSettings | |
SIZE_OF_EXPERIMENTTYPE enum value | ExperimentalSettings | |
software_ | ExperimentalSettings | [protected] |
sortSpectra(bool sort_mz=true) | MSExperiment | [inline] |
source_file_ | ExperimentalSettings | [protected] |
SpectrumType typedef | MSExperiment | |
total_size_ | MSExperiment | [protected] |
type_ | ExperimentalSettings | [protected] |
UNKNOWN enum value | ExperimentalSettings | |
updateRanges() | MSExperiment | [inline, virtual] |
updateRanges(Int ms_level) | MSExperiment | [inline] |
updateRanges_(const PeakIteratorType &begin, const PeakIteratorType &end) | RangeManager< 2 > | [inline, protected] |
~ExperimentalSettings() | ExperimentalSettings | |
~MetaInfoInterface() | MetaInfoInterface | |
~PersistentObject() | PersistentObject | [virtual] |
~RangeManager() | RangeManager< 2 > | [inline, virtual] |