Home  · Classes  · Annotated Classes  · Modules  · Members  · Namespaces  · Related Pages

TheoreticalSpectrumGenerator Parameters

Parameters of TheoreticalSpectrumGenerator:

NameTypeDefaultRestrictionsDescription
add_isotopesint0 If set to 1 isotope peaks of the product ion peaks are added
max_isotopeint2 Defines the maximal isotopic peak which is added, add_isotopes must be set to 1
add_metainfoint0 Adds the type of peaks as metainfo to the peaks, like y8+, [M-H2O+2H]++
add_lossesint0 Adds common losses to those ion expect to have them, only water and ammonia loss is considered
add_precursor_peaksint0 Adds peaks of the precursor to the spectrum, which happen to occur sometimes
y_intensityfloat1 Intensity of the y-ions
b_intensityfloat1 Intensity of the b-ions
a_intensityfloat1 Intensity of the a-ions
c_intensityfloat1 Intensity of the c-ions
x_intensityfloat1 Intensity of the x-ions
z_intensityfloat1 Intensity of the z-ions
relative_loss_intensityfloat0.1 Intensity of loss ions, in relation to the intact ion intensity
precursor_intensityfloat1 Intensity of the precursor peak
precursor_H2O_intensityfloat1 Intensity of the H2O loss peak of the precursor
precursor_NH3_intensityfloat1 Intensity of the NH3 loss peak of the precursor

Note:


Generated Tue Apr 1 15:36:40 2008 -- using doxygen 1.5.4 OpenMS / TOPP 1.1