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ProteinIdentification Member List

This is the complete list of members for ProteinIdentification, including all inherited members.

assignRanks()ProteinIdentification
AVERAGE enum valueProteinIdentification
CHYMOTRYPSIN enum valueProteinIdentification
clearMetaInfo()MetaInfoInterface
createIfNotExists_()MetaInfoInterface [inline, protected]
date_ProteinIdentification [protected]
DigestionEnzyme enum nameProteinIdentification
getDateTime() const ProteinIdentification
getHits() const ProteinIdentification
getIdentifier() const ProteinIdentification
getKeys(std::vector< String > &keys) const MetaInfoInterface
getKeys(std::vector< UInt > &keys) const MetaInfoInterface
getMetaValue(const String &name) const MetaInfoInterface
getMetaValue(UInt index) const MetaInfoInterface
getScoreType() const ProteinIdentification
getSearchEngine() const ProteinIdentification
getSearchEngineVersion() const ProteinIdentification
getSearchParameters() const ProteinIdentification
getSignificanceThreshold() const ProteinIdentification
higher_score_better_ProteinIdentification [protected]
HitType typedefProteinIdentification
id_ProteinIdentification [protected]
insertHit(const ProteinHit &input)ProteinIdentification
isHigherScoreBetter() const ProteinIdentification
isMetaEmpty() const MetaInfoInterface
meta_MetaInfoInterface [protected]
MetaInfoInterface()MetaInfoInterface
MetaInfoInterface(const MetaInfoInterface &rhs)MetaInfoInterface
metaRegistry() const MetaInfoInterface
metaValueExists(const String &name) const MetaInfoInterface
metaValueExists(UInt index) const MetaInfoInterface
MONOISOTOPIC enum valueProteinIdentification
NamesOfDigestionEnzymeProteinIdentification [static]
NamesOfPeakMassTypeProteinIdentification [static]
NO_ENZYME enum valueProteinIdentification
operator!=(const ProteinIdentification &rhs) const ProteinIdentification
OpenMS::MetaInfoInterface::operator!=(const MetaInfoInterface &rhs) const MetaInfoInterface
operator=(const ProteinIdentification &source)ProteinIdentification
OpenMS::MetaInfoInterface::operator=(const MetaInfoInterface &rhs)MetaInfoInterface
operator==(const ProteinIdentification &rhs) const ProteinIdentification
OpenMS::MetaInfoInterface::operator==(const MetaInfoInterface &rhs) const MetaInfoInterface
PeakMassType enum nameProteinIdentification
PEPSIN_A enum valueProteinIdentification
PROTEASE_K enum valueProteinIdentification
protein_hits_ProteinIdentification [protected]
protein_score_type_ProteinIdentification [protected]
protein_significance_threshold_ProteinIdentification [protected]
ProteinIdentification()ProteinIdentification
ProteinIdentification(const ProteinIdentification &source)ProteinIdentification
removeMetaValue(const String &name)MetaInfoInterface
removeMetaValue(UInt index)MetaInfoInterface
search_engine_ProteinIdentification [protected]
search_engine_version_ProteinIdentification [protected]
search_parameters_ProteinIdentification [protected]
setDateTime(const DateTime &date)ProteinIdentification
setHigherScoreBetter(bool higher_is_better)ProteinIdentification
setHits(const std::vector< ProteinHit > &hits)ProteinIdentification
setIdentifier(const String &id)ProteinIdentification
setMetaValue(const String &name, const String &value)MetaInfoInterface
setMetaValue(UInt index, const String &value)MetaInfoInterface
setMetaValue(const String &name, Int value)MetaInfoInterface
setMetaValue(UInt index, Int value)MetaInfoInterface
setMetaValue(const String &name, UInt value)MetaInfoInterface
setMetaValue(UInt index, UInt value)MetaInfoInterface
setMetaValue(const String &name, Real value)MetaInfoInterface
setMetaValue(UInt index, Real value)MetaInfoInterface
setMetaValue(const String &name, DoubleReal value)MetaInfoInterface
setMetaValue(UInt index, DoubleReal value)MetaInfoInterface
setMetaValue(const String &name, const DataValue &value)MetaInfoInterface
setMetaValue(UInt index, const DataValue &value)MetaInfoInterface
setScoreType(const String &type)ProteinIdentification
setSearchEngine(const String &search_engine)ProteinIdentification
setSearchEngineVersion(const String &search_engine_version)ProteinIdentification
setSearchParameters(const SearchParameters &search_parameters)ProteinIdentification
setSignificanceThreshold(Real value)ProteinIdentification
SIZE_OF_DIGESTIONENZYME enum valueProteinIdentification
SIZE_OF_PEAKMASSTYPE enum valueProteinIdentification
sort()ProteinIdentification
TRYPSIN enum valueProteinIdentification
UNKNOWN_ENZYME enum valueProteinIdentification
~MetaInfoInterface()MetaInfoInterface
~ProteinIdentification()ProteinIdentification [virtual]


Generated Tue Apr 1 15:36:47 2008 -- using doxygen 1.5.4 OpenMS / TOPP 1.1