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ResidueDB Member List

This is the complete list of members for ResidueDB, including all inherited members.

addResidue(const Residue &residue)ResidueDB
addResidueModification(ResidueModification modification)ResidueDB
beginResidue()ResidueDB [inline]
beginResidue() const ResidueDB [inline]
beginResidueModification()ResidueDB [inline]
beginResidueModification() const ResidueDB [inline]
buildModifiedResidues_()ResidueDB [protected]
buildResidueModificationNames_()ResidueDB [protected]
buildResidueNames_()ResidueDB [protected]
clear_()ResidueDB [protected]
clearResidueModifications_()ResidueDB [protected]
clearResidues_()ResidueDB [protected]
const_modifications_ResidueDB [protected]
const_residues_ResidueDB [protected]
endResidue()ResidueDB [inline]
endResidue() const ResidueDB [inline]
endResidueModification()ResidueDB [inline]
endResidueModification() const ResidueDB [inline]
getModification(const String &name) const ResidueDB
getModifications(const Residue *residue) const ResidueDB
getModifications(const String &res_name) const ResidueDB
getModifications() const ResidueDB
getNumberOfResidueModifications() const ResidueDB
getNumberOfResidues() const ResidueDB
getResidue(const String &name) const ResidueDB
getResidues(const ResidueModification *modification) const ResidueDB
getResidues(const String &mod_name) const ResidueDB
getResidues() const ResidueDB
hasResidue(const String &name) const ResidueDB
hasResidueModification(const String &name) const ResidueDB
modification_names_ResidueDB [protected]
modifications_ResidueDB [protected]
operator!=(const ResidueDB &rhs) const ResidueDB
operator=(const ResidueDB &aa)ResidueDB
operator==(const ResidueDB &rhs) const ResidueDB
parseResidue_(HashMap< String, String > &values)ResidueDB [protected]
readResidueModificationsFromFile_(const String &filename)ResidueDB [protected]
readResiduesFromFile_(const String &filename)ResidueDB [protected]
residue_names_ResidueDB [protected]
ResidueConstIterator typedefResidueDB
ResidueDB()ResidueDB
ResidueDB(const ResidueDB &residue_db)ResidueDB
ResidueDB(const String &res_filename, const String &mod_filename)ResidueDB
ResidueIterator typedefResidueDB
ResidueModificationConstIterator typedefResidueDB
ResidueModificationIterator typedefResidueDB
residues_ResidueDB [protected]
setModifications(const String &filename)ResidueDB
setResidues(const String &filename)ResidueDB
~ResidueDB()ResidueDB [virtual]


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