00001 // -*- Mode: C++; tab-width: 2; -*- 00002 // vi: set ts=2: 00003 // 00004 // -------------------------------------------------------------------------- 00005 // OpenMS Mass Spectrometry Framework 00006 // -------------------------------------------------------------------------- 00007 // Copyright (C) 2003-2008 -- Oliver Kohlbacher, Knut Reinert 00008 // 00009 // This library is free software; you can redistribute it and/or 00010 // modify it under the terms of the GNU Lesser General Public 00011 // License as published by the Free Software Foundation; either 00012 // version 2.1 of the License, or (at your option) any later version. 00013 // 00014 // This library is distributed in the hope that it will be useful, 00015 // but WITHOUT ANY WARRANTY; without even the implied warranty of 00016 // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU 00017 // Lesser General Public License for more details. 00018 // 00019 // You should have received a copy of the GNU Lesser General Public 00020 // License along with this library; if not, write to the Free Software 00021 // Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA 00022 // 00023 // -------------------------------------------------------------------------- 00024 // $Maintainer: Andreas Bertsch $ 00025 // -------------------------------------------------------------------------- 00026 // 00027 #ifndef OPENMS_FILTERING_TRANSFORMERS_PARENTFILTER_H 00028 #define OPENMS_FILTERING_TRANSFORMERS_PARENTFILTER_H 00029 00030 #include <OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h> 00031 00032 namespace OpenMS 00033 { 00040 class ParentFilter : public FilterFunctor 00041 { 00042 public: 00043 00044 // @name Constructors and Destructors 00045 // @{ 00047 ParentFilter(); 00048 00050 ParentFilter(const ParentFilter& source); 00051 00053 virtual ~ParentFilter(); 00054 // @} 00055 00056 // @name Operators 00057 // @{ 00058 // assignment operator 00059 ParentFilter& operator = (const ParentFilter& source); 00060 // @} 00061 00062 // @name Accessors 00063 // @{ 00065 static FilterFunctor* create() { return new ParentFilter(); } 00066 00068 template <typename SpectrumType> double apply(SpectrumType& spectrum) 00069 { 00071 //vector<double> result; 00072 //result.push_back(0); 00073 //result.push_back(0); 00074 //result.push_back(0); 00075 /* 00076 try{ 00077 result.at(cspec.getParentionCharge()-1) = 1; 00078 } 00079 catch (out_of_range&) 00080 { 00081 cerr << "charge state not in {1,2,3} in spec " << cspec.id() << endl; 00082 } 00083 result.push_back(cspec.getParentMass()); 00084 return result; 00085 */ 00086 return spectrum.getPrecursorPeak().getCharge(); 00087 } 00088 00090 static const String getProductName() 00091 { 00092 return "ParentFilter"; 00093 } 00094 // @} 00095 00096 }; 00097 } 00098 #endif //OPENMS_FILTERING_TRANSFORMERS_PARENTFILTER_H 00099
Generated Tue Apr 1 15:36:36 2008 -- using doxygen 1.5.4 | OpenMS / TOPP 1.1 |