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MascotOutfile.h (Maintainer: Nico Pfeifer)

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00001 // -*- Mode: C++; tab-width: 2; -*-
00002 // vi: set ts=2:
00003 //
00004 // --------------------------------------------------------------------------
00005 //                   OpenMS Mass Spectrometry Framework
00006 // --------------------------------------------------------------------------
00007 //  Copyright (C) 2003-2008 -- Oliver Kohlbacher, Knut Reinert
00008 //
00009 //  This library is free software; you can redistribute it and/or
00010 //  modify it under the terms of the GNU Lesser General Public
00011 //  License as published by the Free Software Foundation; either
00012 //  version 2.1 of the License, or (at your option) any later version.
00013 //
00014 //  This library is distributed in the hope that it will be useful,
00015 //  but WITHOUT ANY WARRANTY; without even the implied warranty of
00016 //  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
00017 //  Lesser General Public License for more details.
00018 //
00019 //  You should have received a copy of the GNU Lesser General Public
00020 //  License along with this library; if not, write to the Free Software
00021 //  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
00022 //
00023 // --------------------------------------------------------------------------
00024 // $Maintainer: Nico Pfeifer $
00025 // --------------------------------------------------------------------------
00026 
00027 #ifndef OPENMS_FORMAT_MASCOTOUTFILE_H
00028 #define OPENMS_FORMAT_MASCOTOUTFILE_H
00029 
00030 #include <OpenMS/CONCEPT/Types.h>
00031 #include <OpenMS/METADATA/PeptideIdentification.h>
00032 #include <OpenMS/METADATA/ProteinIdentification.h>
00033 #include <OpenMS/CONCEPT/Exception.h>
00034 
00035 #include <vector>
00036 
00037 namespace OpenMS
00038 {
00049   class MascotOutfile
00050   {
00051     public:
00052       
00054       MascotOutfile();
00055 
00068       void load(String filename, ProteinIdentification& protein_identification, std::vector<PeptideIdentification>& peptide_identifications, Real p = 0.05) throw (Exception::ParseError);
00069 
00070     protected:
00071 
00072    };
00073 
00074 } //namespace OpenMS
00075 
00076 #endif // OPENMS_FORMAT_MASCOTOUTFILE_H

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