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StarAlignment Member List

This is the complete list of members for StarAlignment, including all inherited members.

alignMultipleConsensusMaps_()StarAlignment [inline, protected]
alignMultipleFeatureMaps_()StarAlignment [inline, protected]
alignMultiplePeakMaps_()StarAlignment [inline, protected]
assignReferenceMap_()StarAlignment [inline, protected]
Base typedefStarAlignment
BaseAlignment()BaseAlignment [inline]
buildConsensusVectorType_(UInt map_index, std::vector< ConsensusElementType > &cons_map)BaseAlignment [inline, protected]
buildConsensusVectorTypeInsertInGroup_(UInt map_index, std::vector< ConsensusElementType > &cons_map)BaseAlignment [inline, protected]
check_defaults_DefaultParamHandler [protected]
ConsensusElementPairVectorType typedefStarAlignment
ConsensusElementType typedefStarAlignment
ConsensusVectorType typedefStarAlignment
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
defaults_DefaultParamHandler [protected]
defaultsToParam_()DefaultParamHandler [protected]
ElementContainerType typedefStarAlignment
ElementPairType typedefStarAlignment
ElementPairVectorType typedefStarAlignment
ElementType typedefStarAlignment
error_name_DefaultParamHandler [protected]
final_consensus_map_BaseAlignment [protected]
getAlignmentTree() const StarAlignment [inline, virtual]
getDefaults() const DefaultParamHandler
getElementMapVector()BaseAlignment [inline]
getElementMapVector() const BaseAlignment [inline]
getFileNames() const BaseAlignment [inline]
getFinalConsensusMap() const BaseAlignment [inline]
getMapType() const BaseAlignment [inline]
getName() const DefaultParamHandler
getParameters() const DefaultParamHandler
getReferenceMapIndex() const StarAlignment [inline]
getSubsections() const DefaultParamHandler
getTransformationVector() const BaseAlignment [inline]
IntensityType typedefStarAlignment
map_type_BaseAlignment [protected]
Maps enum nameStarAlignment
merge(ConsensusMap< ConsensusElementType > &new_map)StarAlignment [inline]
MODEL enum valueStarAlignment
operator=(const DefaultParamHandler &rhs)DefaultParamHandler [virtual]
operator==(const DefaultParamHandler &rhs) const DefaultParamHandler [virtual]
param_DefaultParamHandler [protected]
PeakConstReferenceMapType typedefStarAlignment
PositionType typedefStarAlignment
QualityType typedefStarAlignment
reference_map_index_StarAlignment [protected]
run()StarAlignment [inline, virtual]
SCENE enum valueStarAlignment
setElementMapVector(const std::vector< ElementContainerType * > &element_map_vector)BaseAlignment [inline]
setFileNames(const std::vector< String > &file_names)BaseAlignment [inline]
setFinalConsensusMap(const ConsensusMap< ConsensusElementType > &final_consensus_map)BaseAlignment [inline]
setMapType(const String &map_type)BaseAlignment [inline]
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
setReferenceMapIndex(UInt index)StarAlignment [inline]
setTransformationVector(const std::vector< Grid > &transformations)BaseAlignment [inline]
StarAlignment()StarAlignment [inline]
subsections_DefaultParamHandler [protected]
transformations_BaseAlignment [protected]
updateMembers_()BaseAlignment [inline, protected, virtual]
~BaseAlignment()BaseAlignment [inline, virtual]
~DefaultParamHandler()DefaultParamHandler [virtual]
~StarAlignment()StarAlignment [inline, virtual]


Generated Tue Apr 1 15:36:42 2008 -- using doxygen 1.5.4 OpenMS / TOPP 1.1