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PoseClusteringAffineSuperimposer Parameters

Parameters of PoseClusteringAffineSuperimposer:

NameTypeDefaultRestrictionsDescription
tuple_search:mz_bucket_sizefloat0.5 An estimate of m/z deviation of corresponding elements in different maps.
transformation_space:shift_bucket_size:RTfloat10 Defines the shift parameter's bucket size during histograming.
transformation_space:shift_bucket_size:MZfloat0.01 Defines the shift parameter's bucket size during histograming.
transformation_space:scaling_bucket_size:RTfloat0.01 Defines the scaling parameter's bucket size during histograming.
transformation_space:scaling_bucket_size:MZfloat0.01 Defines the scaling parameter's bucket size during histograming.
transformation_space:bucket_window_shift:RTint2 Number of surrounding buckets of element indices to be considered when computing the shift parameter.
transformation_space:bucket_window_shift:MZint2 Number of surrounding buckets of element indices to be considered when computing the shift parameter.
transformation_space:bucket_window_scaling:RTint2 Number of surrounding buckets of element indices to be considered when computing the scaling parameter.
transformation_space:bucket_window_scaling:MZint2 Number of surrounding buckets of element indices to be considered when computing the scaling parameter.
transformation_space:min_shift:RTfloat-1000 Minimal shift parameter which is considered during histogramming.
transformation_space:min_shift:MZfloat-5 Minimal shift parameter which is considered during histogramming.
transformation_space:max_shift:RTfloat1000 Maximal shift parameter which is considered during histogramming.
transformation_space:max_shift:MZfloat5 Maximal shift parameter which is considered during histogramming.
transformation_space:min_scaling:RTfloat0.5 Minimal scaling parameter which is considered during histogramming.
transformation_space:min_scaling:MZfloat0.8 Minimal scaling parameter which is considered during histogramming.
transformation_space:max_scaling:RTfloat2 Maximal scaling parameter which is considered during histogramming.
transformation_space:max_scaling:MZfloat1.2 Maximal scaling parameter which is considered during histogramming.

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