Name | Type | Default | Restrictions | Description |
interpolation_step | float | 0.2 | | Sampling rate for the interpolation of the model function. |
tolerance_stdev_bounding_box | float | 3 | | Bounding box has range [minimim of data, maximum of data] enlarged by tolerance_stdev_bounding_box times the standard deviation of the data. |
charge | int | 1 | | Charge state of the model. |
statistics:mean | float | 1 | | Centroid position of the model. |
statistics:variance | float | 1 | | Variance of the model. |
isotope:stdev | float | 0.1 | | Standard deviation of gaussian applied to the averagine isotopic pattern to simulate the inaccuracy of the mass spectrometer. |
isotope:monoisotopic_mz | float | 1 | | Monoisotopic m/z of the model. |
isotope:maximum | int | 100 | | Maximum isotopic rank to be considered. |